RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KIRREL2Q6UWL6 708 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 DGAT2L6Q6ZPD8 337 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 QSOX2Q6ZRP7 698 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 LANCL3Q6ZV70 420 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 LARP4Q71RC2 724 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TSPYL5Q86VY4 417 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 NUDCD3Q8IVD9 361 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 RIMKLAQ8IXN7 391 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 GPR135Q8IZ08 494 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CLYBLQ8N0X4 340 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 C1orf52Q8N6N3 182 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 GBP7Q8N8V2 638 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ACOT4Q8N9L9 421 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TTC29Q8NA56 475 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PLPP5Q8NEB5 264 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 NFAM1Q8NET5 270 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 OR51Q1Q8NH59 317 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 METTL6Q8TCB7 284 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MGARPQ8TDB4 240 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TWIST2Q8WVJ9 160 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 KCNE4Q8WWG9 221 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SELENOMQ8WWX9 145 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 STON2Q8WXE9 905 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PSMF1Q92530 271 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF75CPQ92670 426 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MR1Q95460 341 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TSLPQ969D9 159 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 UBE2E3Q969T4 207 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 RERGQ96A58 199 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ANKRD9Q96BM1 317 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TM4SF18Q96CE8 201 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MTFMTQ96DP5 389 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CLIP3Q96DZ5 547 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF764Q96H86 408 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 METTL2AQ96IZ6 378 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 EGLN2Q96KS0 407 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 IMMP1LQ96LU5 166 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MAGEB10Q96LZ2 347 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF681Q96N22 645 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF317Q96PQ6 595 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 OR1F2PQ96R84 312 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SERINC2Q96SA4 455 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SERPINI1Q99574 410 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 NPAS2Q99743 824 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TBCDQ9BTW9 1192 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF747Q9BV97 191 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 NPLQ9BXD5 320 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 RBCK1Q9BYM8 510 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TRIM4Q9C037 500 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 VN1R1Q9GZP7 353 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 REXO4Q9GZR2 422 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF385DQ9H6B1 395 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MANSC1Q9H8J5 431 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MEAF6Q9HAF1 191 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CLK4Q9HAZ1 481 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 KCNK13Q9HB14 408 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CPNE5Q9HCH3 593 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 LYRM4Q9HD34 91 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 NPHS2Q9NP85 383 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 KCNK9Q9NPC2 374 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MKKSQ9NPJ1 570 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MED4Q9NPJ6 270 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SLAMF7Q9NQ25 335 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 NECTIN3Q9NQS3 549 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PNPOQ9NVS9 261 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ASIC5Q9NY37 505 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 HCN3Q9P1Z3 774 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 HEY2Q9UBP5 337 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF223Q9UK11 482 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ADAM29Q9UKF5 820 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PADI1Q9ULC6 663 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SNX6Q9UNH7 406 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PPIEQ9UNP9 301 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ERVK-11Q9UQG0 969 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TRAF6Q9Y4K3 522 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ATG4BQ9Y4P1 393 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ANGPTL3Q9Y5C1 460 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 AK5Q9Y6K8 562 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 DNAJC13O75165 2243 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 IGHV1-45A0A0A0MS14 117 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ATP6AP2A0A1C7CYW4 349 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 GOLGA6L10A6NI86 522 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM200CA6NKL6 621 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 IDSB3KWA1 339 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ADAM10O14672 748 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PGRMC2O15173 223 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 NKX2-8O15522 239 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 KLK10O43240 276 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PROM1O43490 865 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 FGF17O60258 216 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TBX19O60806 448 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SCN2BO60939 215 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ULK1O75385 1050 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SKAP2O75563 359 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 CREG1O75629 220 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ATP6AP2O75787 350 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 CEACAM4O75871 244 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SNUPNO95149 360 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PSMG1O95456 288 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms