RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PLGLB1Q02325 96 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 SRSF11Q05519 484 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 GALNT1Q10472 559 aaPredicted RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TBL3Q12788 808 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 HEPACAMQ14CZ8 416 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 INAQ16352 499 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF468Q5VIY5 522 aaPredicted RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 CLEC6AQ6EIG7 209 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 MRM1Q6IN84 353 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 SLC48A1Q6P1K1 146 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 RNF111Q6ZNA4 994 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 NUDCD3Q8IVD9 361 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 HOMEZQ8IX15 550 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 GALNT12Q8IXK2 581 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 DDIASQ8IXT1 998 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TAGAPQ8N103 731 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 MREGQ8N565 214 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF321PQ8N8H1 164 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ST6GALNAC3Q8NDV1 305 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 SLC22A8Q8TCC7 542 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 AGR3Q8TD06 166 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TCP10LQ8TDR4 215 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 AGAP11Q8TF27 550 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 CHTF18Q8WVB6 975 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 UCN3Q969E3 161 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 EXOSC8Q96B26 276 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TM4SF18Q96CE8 201 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 FBXL20Q96IG2 436 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TAAR6Q96RI8 345 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 BBS4Q96RK4 519 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 NPAS2Q99743 824 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TRMOQ9BU70 441 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF717Q9BY31 904 aaPredicted RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 HES7Q9BYE0 225 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ACPTQ9BZG2 426 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 BRINP2Q9C0B6 783 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TSPAN10Q9H1Z9 355 aaPredicted RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 SLC17A7Q9P2U7 560 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 LGALS13Q9UHV8 139 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 MCM8Q9UJA3 840 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF225Q9UK10 706 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 UTS2RQ9UKP6 389 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 NPIPA1Q9UND3 350 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 PPIEQ9UNP9 301 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ERVK-19Q9WJR5 959 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 DLGAP4Q9Y2H0 992 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 KLF13Q9Y2Y9 288 aaPredicted RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 PCDHGB6Q9Y5F9 930 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 PCDHA9Q9Y5H5 950 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 FER1L5A0AVI2 2057 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 MDC1Q14676 2089 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 NOTCH2Q04721 2471 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 CCDC88CQ9P219 2028 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 TRGV8A0A0C4DH27 118 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 WDR91A4D1P6 747 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 CAPN14A8MX76 684 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 G3V3Y1 287 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 HRKO00198 91 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 SLC28A1O00337 649 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 TFECO14948 347 aaPredicted RBP6.08□□□□□ -1.44
TRAF4-213ENST00000578917 LRRTM2O43300 516 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 PRKNO60260 465 aaPredicted RBP6.08□□□□□ -1.44
TRAF4-213ENST00000578917 NME2P1O60361 137 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 NEURL1O76050 574 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 OR6B1O95007 311 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 HSPA4LO95757 839 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 IL3P08700 152 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 LINC00032P0C843 101 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF24P17028 368 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 NME2P22392 152 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 RFC3P40938 356 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 SOX3P41225 446 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 HTR6P50406 440 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 HK2P52789 917 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 FOXA1P55317 472 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 PER3P56645 1201 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 NRG3P56975 720 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 KCNK10P57789 538 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 GPR85P60893 370 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 IGLV3-21P80748 117 aaPredicted RBP6.08□□□□□ -1.44
TRAF4-213ENST00000578917 PMP22Q01453 160 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF844Q08AG5 666 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 C2orf80Q0P641 193 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 PCLAFQ15004 111 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF750Q32MQ0 723 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 KRTCAP3Q53RY4 240 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 PIGGQ5H8A4 983 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 ARL13AQ5H913 290 aaPredicted RBP6.08□□□□□ -1.44
TRAF4-213ENST00000578917 DGAT2L6Q6ZPD8 337 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 RTL4Q6ZR62 310 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 MDGA2Q7Z553 956 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 SULF2Q8IWU5 870 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 GPALPP1Q8IXQ4 340 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 SAMD14Q8IZD0 417 aaPredicted RBP6.08□□□□□ -1.44
TRAF4-213ENST00000578917 CLYBLQ8N0X4 340 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 MMP21Q8N119 569 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 LRRC25Q8N386 305 aaPredicted RBP6.08□□□□□ -1.44
TRAF4-213ENST00000578917 MDS2Q8NDY4 140 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 FAM13CQ8NE31 585 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 ADCY4Q8NFM4 1077 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms