RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 XKP51811 444 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 PRKAG1P54619 331 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 HPCAP84074 193 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 VLDLRP98155 873 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 SPIBQ01892 262 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 FZD5Q13467 585 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 PRSS53Q2L4Q9 553 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 TCTE1Q5JU00 501 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 GARNL3Q5VVW2 1013 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 ZCCHC12Q6PEW1 402 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 BORAQ6PGQ7 559 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 USP53Q70EK8 1073 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 TRIM73Q86UV7 250 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 MMP21Q8N119 569 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 ARL14Q8N4G2 192 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 AMER3Q8N944 861 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 KCT2Q8NC54 265 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 SUN3Q8TAQ9 357 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 ADAMTS15Q8TE58 950 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 SLC38A5Q8WUX1 472 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 PMM1Q92871 262 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 ELP4Q96EB1 424 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 ZNF354BQ96LW1 612 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 MAPKAP1Q9BPZ7 522 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 ORAI3Q9BRQ5 295 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 LRRC61Q9BV99 259 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 ACTRT3Q9BYD9 372 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 TRIM4Q9C037 500 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 TCEAL2Q9H3H9 227 aaPredicted RBP10.5□□□□□ -0.73
SKA2-204ENST00000578519 SLAMF7Q9NQ25 335 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 KLHL28Q9NXS3 571 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 SCN3BQ9NY72 215 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 PNMA8BQ9ULN7 279 aaPredicted RBP10.5□□□□□ -0.73
SKA2-204ENST00000578519 DAPP1Q9UN19 280 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 ZNF232Q9UNY5 417 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 POFUT2Q9Y2G5 429 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 TPRKBQ9Y3C4 175 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 SIT1Q9Y3P8 196 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 SNX5Q9Y5X3 404 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 CSNK1G3Q9Y6M4 447 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 U3KQV3 271 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 CCDC163A0A0D9SF12 145 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 ARRDC5A6NEK1 342 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 LMO7DNF2Z398 122 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 PLOD2O00469 737 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 HMGN4O00479 90 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 BCKDKO14874 412 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 CASC3O15234 703 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 MRPS14O60783 128 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 CTSVO60911 334 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 CCNB2O95067 398 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 GADD45GO95257 159 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 OXSR1O95747 527 aaPredicted RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 AK1P00568 194 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 LINGO3P0C6S8 592 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 ATP6V1B1P15313 513 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 GNSP15586 552 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 EEF1B2P24534 225 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 FEN1P39748 380 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 KCNJ5P48544 419 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 AFF3P51826 1226 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 HMGA2P52926 109 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 LIM2P55344 173 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 RAB38P57729 211 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 NUP107P57740 925 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 NXPH1P58417 271 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 GABARAPL2P60520 117 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 IL1RL1Q01638 556 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 KCNAB2Q13303 367 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 APOFQ13790 326 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 GAS6Q14393 721 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 C16orf72Q14CZ0 275 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 MICAQ29983 383 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 DEFB134Q4QY38 66 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 GPAT3Q53EU6 434 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 BROXQ5VW32 411 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 C18orf63Q68DL7 685 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 KDM4DQ6B0I6 523 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 OGFOD3Q6PK18 319 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 MCATQ8IVS2 390 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 SLC44A2Q8IWA5 706 aaPredicted RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 LGI4Q8N135 537 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 DEPDC4Q8N2C3 294 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 C19orf47Q8N9M1 422 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 TTC29Q8NA56 475 aaPredicted RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 ZCCHC10Q8TBK6 192 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 ADAMTS16Q8TE57 1224 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 PHF10Q8WUB8 498 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 DNASE2BQ8WZ79 361 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 TAMM41Q96BW9 452 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 AHCYL2Q96HN2 611 aaKnown RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 FBXL20Q96IG2 436 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 MAGED4Q96JG8 741 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 MUS81Q96NY9 551 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 TSC22D3Q99576 134 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 MACROD1Q9BQ69 325 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 FOXQ1Q9C009 403 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 AICDAQ9GZX7 198 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 CHRNA10Q9GZZ6 450 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 RAB33BQ9H082 229 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms