RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 KRTCAP2Q8N6L1 136 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 SLC38A9Q8NBW4 561 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 OR51Q1Q8NH59 317 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 TANKQ92844 425 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 NSL1Q96IY1 281 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 MARK4Q96L34 752 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 OR1F2PQ96R84 312 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 MAPKAP1Q9BPZ7 522 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 SLC25A23Q9BV35 468 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 WDR41Q9HAD4 459 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 ZNF304Q9HCX3 659 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 TXLNGQ9NUQ3 528 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 ATAD3AQ9NVI7 634 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 CCDC167Q9P0B6 97 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 TMEM184BQ9Y519 407 aaPredicted RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 TRAV20A0A0B4J274 112 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 LOC100653049A0A140TA62 436 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 PRSS51A0A1B0GVH4 220 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 NVLO15381 856 aaKnown RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 SCN2BO60939 215 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 ATP5HO75947 161 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 KRT34O76011 436 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 NPPAP01160 153 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 NTRK1P04629 796 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 T-ENOLP0DO92 83 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 RNH1P13489 461 aaKnown RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 CPN2P22792 545 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 HPCAL1P37235 193 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 ETV5P41161 510 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 FRKP42685 505 aaPredicted RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 HNRNPFP52597 415 aaKnown RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 RAB38P57729 211 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 KCNK10P57789 538 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 MC1RQ01726 317 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 TNFRSF17Q02223 184 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 BNIP1Q12981 228 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 CYLC2Q14093 348 aaPredicted RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 MLC1Q15049 377 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 NKAIN1Q4KMZ8 207 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 CPTPQ5TA50 214 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 ANXA8L1Q5VT79 327 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 SLC48A1Q6P1K1 146 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 SHISA2Q6UWI4 295 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 OVCH1Q7RTY7 1134 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 ZNF595Q8IYB9 648 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 DSELQ8IZU8 1212 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 FAM47BQ8NA70 645 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 VPS37AQ8NEZ2 397 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 OR5T3Q8NGG3 340 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 OR9I1Q8NGQ6 314 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 DNAJB8Q8NHS0 232 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 CLHC1Q8NHS4 586 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 DNAJB14Q8TBM8 379 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 TBC1D20Q96BZ9 403 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 SPDL1Q96EA4 605 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 MMABQ96EY8 250 aaPredicted RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 SLC7A5P2Q9GIP4 190 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 SLC26A1Q9H2B4 701 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 RPF2Q9H7B2 306 aaKnown RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 MKKSQ9NPJ1 570 aaPredicted RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 MIEF1Q9NQG6 463 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 SLC22A11Q9NSA0 550 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 TEX10Q9NXF1 929 aaPredicted RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 DHCR7Q9UBM7 475 aaKnown RBP7.53□□□□□ -1.2
COPS3-215ENST00000578317 TAGLN3Q9UI15 199 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 FBXW2Q9UKT8 454 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 NDUFAF1Q9Y375 327 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 PCDHGA7Q9Y5G6 932 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 B3GALT1Q9Y5Z6 326 aa7.53□□□□□ -1.2
COPS3-215ENST00000578317 SYNDIG1LA6NDD5 238 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 CCDC154A6NI56 674 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 VSTM2BA6NLU5 285 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 BBIP1A8MTZ0 92 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 C9orf172C9J069 976 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 RNASET2O00584 256 aaKnown RBP7.52□□□□□ -1.2
COPS3-215ENST00000578317 CLDN4O14493 209 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 PGRMC2O15173 223 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 CFLARO15519 480 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 AKAP10O43572 662 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 HNRNPCL1O60812 293 aaKnown RBP7.52□□□□□ -1.2
COPS3-215ENST00000578317 CTNSO60931 367 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 RDH16O75452 317 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 BMP10O95393 424 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 GPR75O95800 540 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 AIFM1O95831 613 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 KLK3P07288 261 aaPredicted RBP7.52□□□□□ -1.2
COPS3-215ENST00000578317 CYC1P08574 325 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 CD63P08962 238 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 NR2F6P10588 404 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 LAMP1P11279 417 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 COX4I1P13073 169 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 COX7A2P14406 83 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 CD1EP15812 388 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 ITIH1P19827 911 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 ITGAXP20702 1163 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 AGXTP21549 392 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 CALB2P22676 271 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 PPP2R1BP30154 601 aa7.52□□□□□ -1.2
COPS3-215ENST00000578317 S100A3P33764 101 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms