RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 ELP5Q8TE02 316 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 PTPMT1Q8WUK0 201 aaPredicted RBP10.05□□□□□ -0.8
ABR-235ENST00000576964 C11orf24Q96F05 449 aaPredicted RBP10.05□□□□□ -0.8
ABR-235ENST00000576964 FBXL20Q96IG2 436 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 TSSK3Q96PN8 268 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 LMF1Q96S06 567 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 PRPF18Q99633 342 aaKnown RBP10.05□□□□□ -0.8
ABR-235ENST00000576964 BRINP2Q9C0B6 783 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 C20orf27Q9GZN8 174 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.05□□□□□ -0.83e-6■■■■□ 21.4
ABR-235ENST00000576964 SLC35C2Q9NQQ7 365 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 PNPOQ9NVS9 261 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 STMN3Q9NZ72 180 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 NOP53Q9NZM5 478 aaKnown RBP10.05□□□□□ -0.8
ABR-235ENST00000576964 MAPRE3Q9UPY8 281 aa10.05□□□□□ -0.8
ABR-235ENST00000576964 KALRNO60229 2985 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 WASHC1A8K0Z3 465 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 DYNC1I1O14576 645 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 LBPP18428 481 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 SDC1P18827 310 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 ERVK-8P63133 956 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 OCRLQ01968 901 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 KIAA0040Q15053 153 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 SPRED3Q2MJR0 410 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 SMU1Q2TAY7 513 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 ACER2Q5QJU3 275 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 C6orf136Q5SQH8 315 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 IL23RQ5VWK5 629 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 HLA-DQA1Q5Y7H0 255 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 NXNQ6DKJ4 435 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 FAM71E1Q6IPT2 247 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 RNF111Q6ZNA4 994 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 RPS19BP1Q86WX3 136 aaKnown RBP10.04□□□□□ -0.8
ABR-235ENST00000576964 PTRH1Q86Y79 214 aaKnown RBP10.04□□□□□ -0.8
ABR-235ENST00000576964 LRRC34Q8IZ02 419 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 MMP21Q8N119 569 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 LGI4Q8N135 537 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 VWA5B2Q8N398 1253 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 LIX1Q8N485 282 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 HORMAD2Q8N7B1 307 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 THAP3Q8WTV1 239 aaPredicted RBP10.04□□□□□ -0.8
ABR-235ENST00000576964 GFM2Q969S9 779 aaKnown RBP10.04□□□□□ -0.8
ABR-235ENST00000576964 PPCDCQ96CD2 204 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 MTERF3Q96E29 417 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 SENP5Q96HI0 755 aaPredicted RBP10.04□□□□□ -0.8
ABR-235ENST00000576964 C3orf30Q96M34 536 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 MAGEB18Q96M61 343 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 C7orf26Q96N11 449 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 C1orf50Q9BV19 199 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 CDCP1Q9H5V8 836 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 REEP4Q9H6H4 257 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 AKTIPQ9H8T0 292 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 MEAF6Q9HAF1 191 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 SLAMF7Q9NQ25 335 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 ATAD3AQ9NVI7 634 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 SH3BP4Q9P0V3 963 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 PPIEQ9UNP9 301 aaKnown RBP10.04□□□□□ -0.8
ABR-235ENST00000576964 ERVK-19Q9WJR5 959 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 CFL2Q9Y281 166 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 CLDN16Q9Y5I7 305 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 CACNA1GO43497 2377 aa10.04□□□□□ -0.8
ABR-235ENST00000576964 OR6C76A6NM76 312 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 CDK2AP1O14519 115 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 AKAP10O43572 662 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 LRATO95237 230 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 DDAH2O95865 285 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 ATP1B1P05026 303 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 BCKDHAP12694 445 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 PCSK2P16519 638 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 PRPS1L1P21108 318 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 SOX11P35716 441 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.8
ABR-235ENST00000576964 OC90Q02509 493 aaPredicted RBP10.03□□□□□ -0.8
ABR-235ENST00000576964 EMX2Q04743 252 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 C19orf57Q0VDD7 668 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 RPS6KA2Q15349 733 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 TLR1Q15399 786 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 SOWAHCQ53LP3 525 aaPredicted RBP10.03□□□□□ -0.8
ABR-235ENST00000576964 B3GNTL1Q67FW5 361 aaPredicted RBP10.03□□□□□ -0.8
ABR-235ENST00000576964 FCRLBQ6BAA4 426 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 H3F3CQ6NXT2 135 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 IGFL3Q6UXB1 125 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 ATG14Q6ZNE5 492 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 ACAD11Q709F0 780 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 KIF2BQ8N4N8 673 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 TMEM156Q8N614 296 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 APCDD1LQ8NCL9 501 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 NFAM1Q8NET5 270 aaPredicted RBP10.03□□□□□ -0.8
ABR-235ENST00000576964 OR7G1Q8NGA0 311 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 OR8K3Q8NH51 312 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 CLHC1Q8NHS4 586 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 ZFP28Q8NHY6 868 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 CKAP2Q8WWK9 683 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 PSMF1Q92530 271 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 UCN3Q969E3 161 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 FCRL1Q96LA6 429 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 UTP23Q9BRU9 249 aaKnown RBP10.03□□□□□ -0.8
ABR-235ENST00000576964 HEY2Q9UBP5 337 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 GIMAP2Q9UG22 337 aa10.03□□□□□ -0.8
ABR-235ENST00000576964 BCAP29Q9UHQ4 241 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms