RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 LRRC25Q8N386 305 aaPredicted RBP11.04□□□□□ -0.64
PRPF8-215ENST00000576958 C17orf53Q8N3J3 647 aaPredicted RBP11.04□□□□□ -0.64
PRPF8-215ENST00000576958 TCAIMQ8N3R3 496 aa11.04□□□□□ -0.64
PRPF8-215ENST00000576958 FBXW8Q8N3Y1 598 aa11.04□□□□□ -0.64
PRPF8-215ENST00000576958 PPM1NQ8N819 430 aa11.04□□□□□ -0.64
PRPF8-215ENST00000576958 POLDIP3Q9BY77 421 aaKnown RBP11.04□□□□□ -0.64
PRPF8-215ENST00000576958 CNOT10Q9H9A5 744 aaKnown RBP11.04□□□□□ -0.64
PRPF8-215ENST00000576958 ZFP64Q9NPA5 681 aa11.04□□□□□ -0.64
PRPF8-215ENST00000576958 COPS7AQ9UBW8 275 aa11.04□□□□□ -0.64
PRPF8-215ENST00000576958 CBLCQ9ULV8 474 aa11.04□□□□□ -0.64
PRPF8-215ENST00000576958 RNF11Q9Y3C5 154 aa11.04□□□□□ -0.64
PRPF8-215ENST00000576958 A0A0A6YYD5 115 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 C15orf38-AP3S2A0A0A6YYH1 394 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 A0A1W2PPR1 153 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 C17orf51A8MQB3 221 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 PROM1O43490 865 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 TRIM3O75382 744 aaPredicted RBP11.03□□□□□ -0.64
PRPF8-215ENST00000576958 GP5P40197 560 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 ZNF136P52737 540 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 ATP6V0D1P61421 351 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 DUSP2Q05923 314 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 CRYZQ08257 329 aaKnown RBP11.03□□□□□ -0.64
PRPF8-215ENST00000576958 ACSF3Q4G176 576 aaPredicted RBP11.03□□□□□ -0.64
PRPF8-215ENST00000576958 WLSQ5T9L3 541 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 CES4AQ5XG92 561 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 MRM1Q6IN84 353 aaKnown RBP11.03□□□□□ -0.64
PRPF8-215ENST00000576958 ZDHHC24Q6UX98 284 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 RGS9BPQ6ZS82 235 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 C3orf62Q6ZUJ4 267 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 RAPH1Q70E73 1250 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 CDC20BQ86Y33 519 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 ZNF441Q8N8Z8 693 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 OR5L2Q8NGL0 311 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 NEIL3Q8TAT5 605 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 LINC01560Q8TB33 94 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 NUBPLQ8TB37 319 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 FBF1Q8TES7 1133 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 UBTD2Q8WUN7 234 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 SARAFQ96BY9 339 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 FBXL20Q96IG2 436 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 SGCZQ96LD1 299 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 GNRHR2Q96P88 292 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 CPNE1Q99829 537 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 CAPS2Q9BXY5 557 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 PITHD1Q9GZP4 211 aaPredicted RBP11.03□□□□□ -0.64
PRPF8-215ENST00000576958 CXXC4Q9H2H0 198 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
PRPF8-215ENST00000576958 EPB41L4BQ9H329 900 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 RASSF1Q9NS23 344 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 NUDT4Q9NZJ9 180 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 OPTCQ9UBM4 332 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 ST6GALNAC2Q9UJ37 374 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 SAR1BQ9Y6B6 198 aa11.03□□□□□ -0.64
PRPF8-215ENST00000576958 FOXO6A8MYZ6 492 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 K7EPI3 171 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 GNB5O14775 395 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 ZSCAN12O43309 604 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 HCN1O60741 890 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 KERAO60938 352 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 WDR1O75083 606 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 S100BP04271 92 aaPredicted RBP11.02□□□□□ -0.65
PRPF8-215ENST00000576958 CD1EP15812 388 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 KLK2P20151 261 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 TACR1P25103 407 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 GDF1P27539 372 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 KIR2DL3P43628 341 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 SLCO1A2P46721 670 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 RAP1GDS1P52306 607 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 PLIN5Q00G26 463 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 TGM3Q08188 693 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 LAPTM5Q13571 262 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 POU4F3Q15319 338 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 CPSF6Q16630 551 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRPF8-215ENST00000576958 HIST2H2ACQ16777 129 aaPredicted RBP11.02□□□□□ -0.65
PRPF8-215ENST00000576958 PFKFB4Q16877 469 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 TMEM35AQ53FP2 167 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 PAGE2BQ5JRK9 111 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 WIPI1Q5MNZ9 446 aaPredicted RBP11.02□□□□□ -0.65
PRPF8-215ENST00000576958 RIPPLY2Q5TAB7 128 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 HIST2H2AA3Q6FI13 130 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 GOLGA7Q7Z5G4 137 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 CCDC25Q86WR0 208 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 TGIF2LYQ8IUE0 185 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 CLYBLQ8N0X4 340 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 PLD6Q8N2A8 252 aaKnown RBP11.02□□□□□ -0.65
PRPF8-215ENST00000576958 TSPAN17Q96FV3 270 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 CMTM7Q96FZ5 175 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 RILPQ96NA2 401 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 NSUN5Q96P11 429 aaKnown RBP11.02□□□□□ -0.65
PRPF8-215ENST00000576958 TIMP4Q99727 224 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 NAPGQ99747 312 aaPredicted RBP11.02□□□□□ -0.65
PRPF8-215ENST00000576958 DOHHQ9BU89 302 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 NSMCE4AQ9NXX6 385 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 EHD3Q9NZN3 535 aa11.02□□□□□ -0.65
PRPF8-215ENST00000576958 ESYT3A0FGR9 886 aa11.01□□□□□ -0.65
PRPF8-215ENST00000576958 FAM221AA4D161 298 aa11.01□□□□□ -0.65
PRPF8-215ENST00000576958 B4DXG7 233 aa11.01□□□□□ -0.65
PRPF8-215ENST00000576958 PPP6CO00743 305 aa11.01□□□□□ -0.65
PRPF8-215ENST00000576958 OR7A17O14581 309 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms