RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 PRRG4Q9BZD6 226 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 IQCGQ9H095 443 aaKnown RBP4.56□□□□□ -1.68
TSR1-203ENST00000575049 MEAF6Q9HAF1 191 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 MOV10Q9HCE1 1003 aaKnown RBP4.56□□□□□ -1.68
TSR1-203ENST00000575049 ZFP14Q9HCL3 533 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 AGPAT3Q9NRZ7 376 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 DDX28Q9NUL7 540 aaKnown RBP4.56□□□□□ -1.68
TSR1-203ENST00000575049 UBAP1Q9NZ09 502 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 MYO6Q9UM54 1294 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 B9D1Q9UPM9 204 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 TMED7Q9Y3B3 224 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 OR10H1Q9Y4A9 318 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 GMEB1Q9Y692 573 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 CACNA1FO60840 1977 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 TSPOAP1O95153 1857 aa4.56□□□□□ -1.68
TSR1-203ENST00000575049 ADAMTS13Q76LX8 1427 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 CPDO75976 1380 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 PCDH11YQ9BZA8 1340 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 HEATR9A2RTY3 570 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 HYKKA2RU49 373 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 DPPA5A6NC42 116 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 OR6C74A6NCV1 312 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 OR2AG2A6NM03 316 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 TCP11X1B4DZS4 312 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 PPIAL4DF5H284 164 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 M0R296 226 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 RHODO00212 210 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 EIF3HO15372 352 aaKnown RBP eCLIP4.55□□□□□ -1.68
TSR1-203ENST00000575049 SNX3O60493 162 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 BCAS1O75363 584 aaPredicted RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 WDPCPO95876 746 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 LGI1O95970 557 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 GOT2P00505 430 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 CSTAP01040 98 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 IGKV5-2P06315 115 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 HSPD1P10809 573 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 ODC1P11926 461 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 IRF2P14316 349 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 UQCRC2P22695 453 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 FCARP24071 287 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 BDKRB2P30411 391 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 NKX2-1P43699 371 aaPredicted RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 STARP49675 285 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 NR0B1P51843 470 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 CTSCP53634 463 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 CLDN8P56748 225 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 CLDN20P56880 219 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 TAS2R38P59533 333 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 TUBA4AP68366 448 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 ZXDBP98169 803 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 CSTF1Q05048 431 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 LAMB3Q13751 1172 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 GCKRQ14397 625 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 CA9Q16790 459 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 NKAIN1Q4KMZ8 207 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 GPAT3Q53EU6 434 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 ZC2HC1CQ53FD0 456 aaPredicted RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 ZNF311Q5JNZ3 666 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 SPANXN2Q5MJ10 180 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 LIN9Q5TKA1 542 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 LIPKQ5VXJ0 399 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 PYHIN1Q6K0P9 492 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 C11orf63Q6NUN7 778 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 UGT3A1Q6NUS8 523 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 TMEM71Q6P5X7 295 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 CCNI2Q6ZMN8 369 aaPredicted RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 KDM7AQ6ZMT4 941 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 COMMD2Q86X83 199 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 FOXRED2Q8IWF2 684 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 GPR137CQ8N3F9 429 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 PNLDC1Q8NA58 520 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 SMYD1Q8NB12 490 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 NOA1Q8NC60 698 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 RDM1Q8NG50 284 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 MAGEC3Q8TD91 643 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 TRIB2Q92519 343 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 SUSD6Q92537 303 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 GLYATL1Q969I3 302 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 RAB39BQ96DA2 213 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 MRPL53Q96EL3 112 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 THOC1Q96FV9 657 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 RITA1Q96K30 269 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 CHP1Q99653 195 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 CITED1Q99966 193 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 KCNK13Q9HB14 408 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 SPAG4Q9NPE6 437 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 ADARB2Q9NS39 739 aaKnown RBP4.55□□□□□ -1.68
TSR1-203ENST00000575049 RNF146Q9NTX7 359 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 C1RLQ9NZP8 487 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 UTS2RQ9UKP6 389 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 PADI3Q9ULW8 664 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 TMED3Q9Y3Q3 217 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 KDM3BQ7LBC6 1761 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 RICTORQ6R327 1708 aa4.55□□□□□ -1.68
TSR1-203ENST00000575049 USP54Q70EL1 1684 aa4.54□□□□□ -1.68
TSR1-203ENST00000575049 RIMS1Q86UR5 1692 aaKnown RBP4.54□□□□□ -1.68
TSR1-203ENST00000575049 GRIN2DO15399 1336 aa4.54□□□□□ -1.68
TSR1-203ENST00000575049 STK36Q9NRP7 1315 aa4.54□□□□□ -1.68
TSR1-203ENST00000575049 TRAV18A0A075B6X5 111 aa4.54□□□□□ -1.68
TSR1-203ENST00000575049 TRAV26-1A0A087WT03 109 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms