RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 CYP20A1Q6UW02 462 aa18.1■□□□□ 0.49
ABR-231ENST00000574875 HSDL2Q6YN16 418 aa18.1■□□□□ 0.49
ABR-231ENST00000574875 RBM18Q96H35 190 aaKnown RBP18.1■□□□□ 0.49
ABR-231ENST00000574875 FRG2BQ96QU4 278 aa18.1■□□□□ 0.49
ABR-231ENST00000574875 SERPINI1Q99574 410 aa18.1■□□□□ 0.49
ABR-231ENST00000574875 SIKE1Q9BRV8 207 aa18.1■□□□□ 0.49
ABR-231ENST00000574875 ZNF717Q9BY31 904 aaPredicted RBP18.1■□□□□ 0.49
ABR-231ENST00000574875 OR8D2Q9GZM6 311 aa18.1■□□□□ 0.49
ABR-231ENST00000574875 LIN28AQ9H9Z2 209 aaKnown RBP18.1■□□□□ 0.49
ABR-231ENST00000574875 SEMA4BQ9NPR2 832 aaPredicted RBP18.1■□□□□ 0.49
ABR-231ENST00000574875 PPT2Q9UMR5 302 aa18.1■□□□□ 0.49
ABR-231ENST00000574875 SPTAN1Q13813 2472 aaKnown RBP18.1■□□□□ 0.49
ABR-231ENST00000574875 TMEM200CA6NKL6 621 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 CCT8L1PA6NM43 557 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 G3V2L1 256 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 FGF17O60258 216 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 TRIM13O60858 407 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 EEDO75530 441 aaKnown RBP18.09■□□□□ 0.49
ABR-231ENST00000574875 SNUPNO95149 360 aaKnown RBP18.09■□□□□ 0.49
ABR-231ENST00000574875 BUD31P41223 144 aaPredicted RBP18.09■□□□□ 0.49
ABR-231ENST00000574875 SSR4P51571 173 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 CDH13P55290 713 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 IGLV3-21P80748 117 aaPredicted RBP18.09■□□□□ 0.49
ABR-231ENST00000574875 TNFRSF17Q02223 184 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 RBPJQ06330 500 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 IFT88Q13099 833 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 TRAF3Q13114 568 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 C1QL3Q5VWW1 255 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 MRM1Q6IN84 353 aaKnown RBP18.09■□□□□ 0.49
ABR-231ENST00000574875 MYO7BQ6PIF6 2116 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 CCDC121Q6ZUS5 278 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 RPS27LQ71UM5 84 aaKnown RBP18.09■□□□□ 0.49
ABR-231ENST00000574875 FJX1Q86VR8 437 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 C10orf107Q8IVU9 208 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 GBP7Q8N8V2 638 aaPredicted RBP18.09■□□□□ 0.49
ABR-231ENST00000574875 OR4F6Q8NGB9 312 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 OR6Y1Q8NGX8 325 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 RELTQ969Z4 430 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 CCDC126Q96EE4 140 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 FRMD6Q96NE9 622 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 DGAT2Q96PD7 388 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 OXSMQ9NWU1 459 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 LYARQ9NX58 379 aaKnown RBP18.09■□□□□ 0.49
ABR-231ENST00000574875 MYOTQ9UBF9 498 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 ASB4Q9Y574 426 aa18.09■□□□□ 0.49
ABR-231ENST00000574875 A0A0A6YYD5 115 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 A8MT66 165 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 NPIPA5E9PKD4 350 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 RPS17P08708 135 aaKnown RBP18.08■□□□□ 0.48
ABR-231ENST00000574875 FAM58BPP0C7Q3 252 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 COX7A2P14406 83 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 STT3AP46977 705 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 FOLH1Q04609 750 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.08■□□□□ 0.48
ABR-231ENST00000574875 C10orf62Q5T681 223 aaPredicted RBP18.08■□□□□ 0.48
ABR-231ENST00000574875 LIPMQ5VYY2 423 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 HIST2H2BCQ6DN03 193 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 C16orf47Q6ZP98 133 aaPredicted RBP18.08■□□□□ 0.48
ABR-231ENST00000574875 CYP4Z2PQ8N1L4 340 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 ZNF321PQ8N8H1 164 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 SLC2A12Q8TD20 617 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 ZNF483Q8TF39 744 aaPredicted RBP18.08■□□□□ 0.48
ABR-231ENST00000574875 PPWD1Q96BP3 646 aaKnown RBP18.08■□□□□ 0.48
ABR-231ENST00000574875 C1QTNF3Q9BXJ4 246 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 AHSPQ9NZD4 102 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 NPIPA1Q9UND3 350 aa18.08■□□□□ 0.48
ABR-231ENST00000574875 KLF13Q9Y2Y9 288 aaPredicted RBP18.08■□□□□ 0.48
ABR-231ENST00000574875 UTP20O75691 2785 aaKnown RBP18.08■□□□□ 0.48
ABR-231ENST00000574875 TRGV8A0A0C4DH27 118 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 A0A1W2PR48 441 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 KLRC4-KLRK1H3BQV0 150 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 WWP2O00308 870 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 PPP6CO00743 305 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 TMPRSS11DO60235 418 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 DCTN3O75935 186 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 OR2J2O76002 312 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 SEMA3DO95025 777 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 GPR75O95800 540 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 OTCP00480 354 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 SERPINB5P36952 375 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 SLC1A6P48664 564 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 RNF4P78317 190 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 GGTA1PQ4G0N0 100 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 SGO1Q5FBB7 561 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 TRPM8Q7Z2W7 1104 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 MAMDC2Q7Z304 686 aaPredicted RBP18.07■□□□□ 0.48
ABR-231ENST00000574875 NUDT13Q86X67 352 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 SULF2Q8IWU5 870 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 CPSF7Q8N684 471 aaKnown RBP18.07■□□□□ 0.48
ABR-231ENST00000574875 OR5L2Q8NGL0 311 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 OR8K3Q8NH51 312 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 ZNF721Q8TF20 911 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 C10orf82Q8WW14 230 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 ASB15Q8WXK1 588 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 SENP5Q96HI0 755 aaPredicted RBP18.07■□□□□ 0.48
ABR-231ENST00000574875 GPR137Q96N19 417 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 TSPAN10Q9H1Z9 355 aaPredicted RBP18.07■□□□□ 0.48
ABR-231ENST00000574875 ELOVL6Q9H5J4 265 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 WDR41Q9HAD4 459 aa18.07■□□□□ 0.48
ABR-231ENST00000574875 NPHS2Q9NP85 383 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms