RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 C1orf109Q9NX04 203 aa16.09■□□□□ 0.17
CLDN7-207ENST00000574070 ANKRD10Q9NXR5 420 aa16.09■□□□□ 0.17
CLDN7-207ENST00000574070 UTS2RQ9UKP6 389 aa16.09■□□□□ 0.17
CLDN7-207ENST00000574070 CSAG2Q9Y5P2 127 aa16.09■□□□□ 0.17
CLDN7-207ENST00000574070 ZNF780BQ9Y6R6 833 aa16.09■□□□□ 0.17
CLDN7-207ENST00000574070 OR5H15A6NDH6 313 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 GABRR3A8MPY1 467 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 FCHO1O14526 889 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 MAN1A2O60476 641 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 CPMP14384 443 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 DRD2P14416 443 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 PORP16435 677 aaPredicted RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 FEN1P39748 380 aaKnown RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 GSTM5P46439 218 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 SLC18A1P54219 525 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 WDR4P57081 412 aaKnown RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 ERVK-8P63133 956 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 RPL38P63173 70 aaKnown RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 OC90Q02509 493 aaPredicted RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 ZNF169Q14929 603 aaPredicted RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 TLR1Q15399 786 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 ZNF750Q32MQ0 723 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 PLEKHN1Q494U1 663 aaPredicted RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 NOXRED1Q6NXP6 359 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 GALNT18Q6P9A2 607 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 HSDL2Q6YN16 418 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 DGAT2L6Q6ZPD8 337 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 Q6ZS92 163 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 RNF165Q6ZSG1 346 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 Q6ZSR9 355 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 TRIM42Q8IWZ5 723 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 ZNF781Q8N8C0 355 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 ZNF321PQ8N8H1 164 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 FAM76AQ8TAV0 307 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 HAS2Q92819 552 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 EXOSC8Q96B26 276 aaKnown RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 UTP23Q9BRU9 249 aaKnown RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 EPN3Q9H201 632 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 GIMAP4Q9NUV9 329 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 SIRT5Q9NXA8 310 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 HEY2Q9UBP5 337 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 PPIEQ9UNP9 301 aaKnown RBP16.08■□□□□ 0.16
CLDN7-207ENST00000574070 ERVK-19Q9WJR5 959 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 ENTPD4Q9Y227 616 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 RAP2CQ9Y3L5 183 aa16.08■□□□□ 0.16
CLDN7-207ENST00000574070 A0A1W2PS29 197 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 SNUPNO95149 360 aaKnown RBP16.07■□□□□ 0.16
CLDN7-207ENST00000574070 DDAH2O95865 285 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 CSNK2A2P19784 350 aaPredicted RBP16.07■□□□□ 0.16
CLDN7-207ENST00000574070 PRPH2P23942 346 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 GPR143P51810 404 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 MLLT10P55197 1068 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 TLE1Q04724 770 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 BST1Q10588 318 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 PDCD2Q16342 344 aaPredicted RBP16.07■□□□□ 0.16
CLDN7-207ENST00000574070 UGT3A2Q3SY77 523 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 TTMPQ5BVD1 217 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 CES4AQ5XG92 561 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 ATG16L1Q676U5 607 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 FAM180BQ6P0A1 224 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 GALNT12Q8IXK2 581 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 SENP5Q96HI0 755 aaPredicted RBP16.07■□□□□ 0.16
CLDN7-207ENST00000574070 METTL2AQ96IZ6 378 aaKnown RBP16.07■□□□□ 0.16
CLDN7-207ENST00000574070 PPP1R36Q96LQ0 422 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 PPP3R2Q96LZ3 170 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 NPAS2Q99743 824 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 BRINP2Q9C0B6 783 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 ACBD3Q9H3P7 528 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 LIN28AQ9H9Z2 209 aaKnown RBP16.07■□□□□ 0.16
CLDN7-207ENST00000574070 MIEF1Q9NQG6 463 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLDN7-207ENST00000574070 ZNF223Q9UK11 482 aaPredicted RBP16.07■□□□□ 0.16
CLDN7-207ENST00000574070 CES1P1Q9UKY3 287 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 CCL27Q9Y4X3 112 aa16.07■□□□□ 0.16
CLDN7-207ENST00000574070 CREBBPQ92793 2442 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 TRAV17A0A0B4J275 112 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 ATP6AP2A0A1C7CYW4 349 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 PEX11AO75192 247 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 ATP6AP2O75787 350 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 GP1BBP13224 206 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 RPL14P50914 215 aaKnown RBP16.06■□□□□ 0.16
CLDN7-207ENST00000574070 MLF1P58340 268 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 SPRED3Q2MJR0 410 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 ATP6AP1LQ52LC2 224 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 RNF111Q6ZNA4 994 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 KIRREL3Q8IZU9 778 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 LGI4Q8N135 537 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 TMEM156Q8N614 296 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 OR5L2Q8NGL0 311 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 ZNF721Q8TF20 911 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 TUBGCP3Q96CW5 907 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 C11orf24Q96F05 449 aaPredicted RBP16.06■□□□□ 0.16
CLDN7-207ENST00000574070 CCT7Q99832 543 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 RNF32Q9H0A6 362 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.06■□□□□ 0.16
CLDN7-207ENST00000574070 TMED5Q9Y3A6 229 aa16.06■□□□□ 0.16
CLDN7-207ENST00000574070 RP1L1Q8IWN7 2480 aaPredicted RBP16.06■□□□□ 0.16
CLDN7-207ENST00000574070 UQCRHLA0A096LP55 91 aa16.05■□□□□ 0.16
CLDN7-207ENST00000574070 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
CLDN7-207ENST00000574070 NPIPB8E9PQR5 432 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms