RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ZNF446Q9NWS9 450 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 STMN3Q9NZ72 180 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 ANAPC2Q9UJX6 822 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 CES1P1Q9UKY3 287 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 MAPRE3Q9UPY8 281 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 EIF3LQ9Y262 564 aaKnown RBP11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 SPTA1P02549 2419 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 TLN1Q9Y490 2541 aaKnown RBP11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 ATP6AP2A0A1C7CYW4 349 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 HDAC3O15379 428 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 ATP6AP2O75787 350 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 PRPS2P11908 318 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 PCSK2P16519 638 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 NT5EP21589 574 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 MPIP34949 423 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 SOX11P35716 441 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 CASRP41180 1078 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 ARG2P78540 354 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 OCRLQ01968 901 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF267Q14586 743 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 ACER2Q5QJU3 275 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 C6orf136Q5SQH8 315 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 FAM71E1Q6IPT2 247 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 IGFL2Q6UWQ7 119 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 RPS19BP1Q86WX3 136 aaKnown RBP11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 APCDD1LQ8NCL9 501 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR8K3Q8NH51 312 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 SUN3Q8TAQ9 357 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 PIWIL2Q8TC59 973 aaKnown RBP11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 PSMF1Q92530 271 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 PPWD1Q96BP3 646 aaKnown RBP11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 SENP5Q96HI0 755 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 FBXL20Q96IG2 436 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 FCRL1Q96LA6 429 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 BBS4Q96RK4 519 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 CNPPD1Q9BV87 410 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 SEMA4CQ9C0C4 833 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 RNF32Q9H0A6 362 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 MEAF6Q9HAF1 191 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 PNPOQ9NVS9 261 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 NOP53Q9NZM5 478 aaKnown RBP11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 HEY2Q9UBP5 337 aa11.9□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR6C76A6NM76 312 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 WASHC1A8K0Z3 465 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 PDGFAP04085 211 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 ATP1B1P05026 303 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 KITP10721 976 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 BCKDHAP12694 445 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 SDC1P18827 310 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 NTSP30990 170 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 HPCAL1P37235 193 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 GPR143P51810 404 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 ERVK-8P63133 956 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 EMX2Q04743 252 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 C19orf57Q0VDD7 668 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 RNF111Q6ZNA4 994 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 SLC29A4Q7RTT9 530 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 PTRH1Q86Y79 214 aaKnown RBP11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 TICAM1Q8IUC6 712 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 KIF2BQ8N4N8 673 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 HORMAD2Q8N7B1 307 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 HAS2Q92819 552 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 UCN3Q969E3 161 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 EXOSC8Q96B26 276 aaKnown RBP11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 MTERF3Q96E29 417 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF764Q96H86 408 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 PPP1R36Q96LQ0 422 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 C3orf30Q96M34 536 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 MAGEB18Q96M61 343 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 C7orf26Q96N11 449 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 TSSK3Q96PN8 268 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 PRPF18Q99633 342 aaKnown RBP11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 CDCP1Q9H5V8 836 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 CXorf21Q9HAI6 301 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 SLC35C2Q9NQQ7 365 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 TAS2R7Q9NYW3 318 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 RALYQ9UKM9 306 aaKnown RBP11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 ERVK-19Q9WJR5 959 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 CFL2Q9Y281 166 aa11.89□□□□□ -0.51
TRAPPC1-206ENST00000573989 K7EM74 188 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 BCAS2O75934 225 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 DDAH2O95865 285 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 LBPP18428 481 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 TLR1Q15399 786 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 IL23RQ5VWK5 629 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 B3GNTL1Q67FW5 361 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 WDR75Q8IWA0 830 aaKnown RBP11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 CCDC116Q8IYX3 515 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 MMP21Q8N119 569 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 VWA5B2Q8N398 1253 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 LIX1Q8N485 282 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 NATD1Q8N6N6 113 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 OR7G1Q8NGA0 311 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF721Q8TF20 911 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 CKAP2Q8WWK9 683 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms