RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MVB12BQ9H7P6 319 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 RMI1Q9H9A7 625 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 C5AR2Q9P296 337 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 SNX7Q9UNH6 387 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 BOLA1Q9Y3E2 137 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 PLXNA2O75051 1894 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 PDE4DIPQ5VU43 2346 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 PLPP1O14494 284 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 PDPK1O15530 556 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 TMCC2O75069 709 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 NME6O75414 186 aaPredicted RBP14.83□□□□□ -0.04
NUP88-207ENST00000573584 RPS5P46782 204 aaKnown RBP14.83□□□□□ -0.04
NUP88-207ENST00000573584 SMIM11AP58511 58 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 PDZK1Q5T2W1 519 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 NANOGNBQ7Z5D8 188 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 ZNF366Q8N895 744 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 OR52I1Q8NGK6 324 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 ZNF607Q96SK3 696 aa14.83□□□□□ -0.04
NUP88-207ENST00000573584 DIMT1Q9UNQ2 313 aaKnown RBP14.83□□□□□ -0.04
NUP88-207ENST00000573584 HMGN4O00479 90 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 PI15O43692 258 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 MSL3P1P0C860 447 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 SYN1P17600 705 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 CXCR2P25025 360 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 WEE1P30291 646 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 ETV5P41161 510 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 ETV1P50549 477 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 ASAH1Q13510 395 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 ATAT1Q5SQI0 421 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 PRAMEF14Q5SWL7 426 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 PRAMEF13Q5VWM6 474 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 XKRXQ6PP77 449 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 KRT78Q8N1N4 520 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 FAM26EQ8N5C1 309 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 LRR1Q96L50 414 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 MRGPRX3Q96LB0 322 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 MIXL1Q9H2W2 232 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 WDR70Q9NW82 654 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 SPIN1Q9Y657 262 aaPredicted RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 K7ESM1 405 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 SLC28A2O43868 658 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 B4GALT2O60909 372 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 LILRB5O75023 590 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 RAB36O95755 333 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 TP53P04637 393 aaPredicted RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 C8AP07357 584 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 FHP07954 510 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 CSF3P09919 207 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 CCR2P41597 374 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 SYT14P1Q58G82 188 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 LY6G5CQ5SRR4 150 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 NRSN1Q8IZ57 195 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 CLDN22Q8N7P3 220 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 FAM181AQ8N9Y4 354 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 VN1R2Q8NFZ6 395 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 PXYLP1Q8TE99 480 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 SETD7Q8WTS6 366 aaKnown RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 TM4SF18Q96CE8 201 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 MSLNLQ96KJ4 702 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 TMEM246Q9BRR3 403 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 PAQR5Q9NXK6 330 aaPredicted RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 PLEKHB1Q9UF11 243 aaPredicted RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 PLAGL1Q9UM63 463 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 CENPBD1B2RD01 187 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 LGI1O95970 557 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 CPEP16870 476 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 GINS1Q14691 196 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 PODNL1Q6PEZ8 512 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 VASH1Q7L8A9 365 aaPredicted RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 RASSF5Q8WWW0 418 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 F2RL3Q96RI0 385 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 TREX2Q9BQ50 279 aaPredicted RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 POLDIP3Q9BY77 421 aaKnown RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 C11orf54Q9H0W9 315 aaPredicted RBP14.82□□□□□ -0.04
NUP88-207ENST00000573584 NEUROD4Q9HD90 331 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 SPHK2Q9NRA0 654 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.82□□□□□ -0.04
NUP88-207ENST00000573584 TBC1D14Q9P2M4 693 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 ACAD8Q9UKU7 415 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 CARD8Q9Y2G2 431 aa14.82□□□□□ -0.04
NUP88-207ENST00000573584 TSPAN19P0C672 248 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 TRAPPC2P0DI81 140 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 TRAPPC2BP0DI82 140 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 SDC2P34741 201 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 GIPRP48546 466 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 DMPKQ09013 629 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 CCDC149Q6ZUS6 474 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 LAPTM4BQ86VI4 370 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 FAM129CQ86XR2 697 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 GDPD1Q8N9F7 314 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 SMPDL3AQ92484 453 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 EXOSC8Q96B26 276 aaKnown RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 C1GALT1C1Q96EU7 318 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 FUZQ9BT04 418 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 ZCCHC2Q9C0B9 1178 aaKnown RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 DKK3Q9UBP4 350 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 TESQ9UGI8 421 aaKnown RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 A4GNTQ9UNA3 340 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 SMIM30A4D0T7 59 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 M0R3H8 397 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms