RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 RHOJQ9H4E5 214 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 PLEKHF2Q9H8W4 249 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 IKBKGQ9Y6K9 419 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 NCKAP5O14513 1909 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 OR6C76A6NM76 312 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 CLCA1A8K7I4 914 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 FAM171A2A8MVW0 826 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 CCDC188H7C350 402 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 HRKO00198 91 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 TP53I11O14683 189 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 TRIM3O75382 744 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-204ENST00000570902 TRAPPC6AO75865 159 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 ALOX15P16050 662 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-204ENST00000570902 CTSSP25774 331 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 IVDP26440 423 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 OPRM1P35372 400 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 CASP2P42575 452 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 ARL4CP56559 192 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 WNT3P56703 355 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 POU4F1Q01851 419 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 SLAMF1Q13291 335 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 SPRED3Q2MJR0 410 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 FBXO48Q5FWF7 155 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 SYDE1Q6ZW31 735 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-204ENST00000570902 TAOK1Q7L7X3 1001 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 ST13P4Q8IZP2 240 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-204ENST00000570902 PDPRQ8NCN5 879 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 DIO2Q92813 273 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 ESAMQ96AP7 390 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 CMTM7Q96FZ5 175 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 SMR3AQ99954 134 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 TRIM31Q9BZY9 425 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 BEX4Q9NWD9 120 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-204ENST00000570902 MOCS1Q9NZB8 636 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 PHF11Q9UIL8 331 aa17.41■□□□□ 0.38
SCARF1-204ENST00000570902 CD8B2A6NJW9 211 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 KDM4EB2RXH2 506 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 EEF1E1-BLOC1S5C9J1V9 151 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 EEF1E1O43324 174 aaKnown RBP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 OR10H2O60403 315 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 CCNT2O60583 730 aaKnown RBP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 SNX4O95219 450 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 LRATO95237 230 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 IL18BPO95998 194 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 TGFB1P01137 390 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 S100BP04271 92 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 HPNP05981 417 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 PCNAP12004 261 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 CASQ1P31415 396 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 ATP6V0D1P61421 351 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 DCAF7P61962 342 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 ETF1P62495 437 aaKnown RBP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 HERVK_113P63132 956 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 ERVK-8P63133 956 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 TNFRSF17Q02223 184 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 E2F2Q14209 437 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 PCBP2Q15366 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 NHSL2Q5HYW2 709 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 KHDRBS2Q5VWX1 349 aaKnown RBP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 SHEQ5VZ18 495 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 VASNQ6EMK4 673 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 OR4C11Q6IEV9 310 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 MED27Q6P2C8 311 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 CLEC9AQ6UXN8 241 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 DGAT2L6Q6ZPD8 337 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 Q71RC1 249 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 GPR180Q86V85 440 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 ANKMY2Q8IV38 441 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 LAS2Q8IYD9 372 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 LINC01560Q8TB33 94 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 TSPAN17Q96FV3 270 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 CENPKQ9BS16 269 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 ERVK-6Q9BXR3 956 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 EPB41L4BQ9H329 900 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 CD274Q9NZQ7 290 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 RNF14Q9UBS8 474 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 PTBP2Q9UKA9 531 aaKnown RBP17.4■□□□□ 0.38
SCARF1-204ENST00000570902 CAMK2AQ9UQM7 478 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 ERVK-19Q9WJR5 959 aa17.4■□□□□ 0.38
SCARF1-204ENST00000570902 MBD3L4A6NDZ8 208 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 MBD3L3A6NE82 208 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 MBD3L5A6NJ08 208 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 WISP3O95389 354 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 CCDC166P0CW27 439 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 EPORP19235 508 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 BUD31P41223 144 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 CDK9P50750 372 aaKnown RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 SLC37A1P57057 533 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 MRPS25P82663 173 aaKnown RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 ZNF267Q14586 743 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 EBPQ15125 230 aaKnown RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 RPS6KA2Q15349 733 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 LRRC70Q7Z2Q7 622 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 PACS2Q86VP3 889 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 SPATA6LQ8N4H0 392 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 MBD3L2Q8NHZ7 208 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-204ENST00000570902 RIT1Q92963 219 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 TRIB1Q96RU8 372 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 MCMBPQ9BTE3 642 aa17.39■□□□□ 0.37
SCARF1-204ENST00000570902 UBQLN3Q9H347 655 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms