RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 PRAMEF20Q5VT98 475 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 CES4AQ5XG92 561 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 CLYBLQ8N0X4 340 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 LRRC25Q8N386 305 aaPredicted RBP13.6□□□□□ -0.23
NDE1-203ENST00000570727 FBXW8Q8N3Y1 598 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 OR10G3Q8NGC4 313 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 ART5Q96L15 291 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 ERVK-6Q9BXR3 956 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 WWTR1Q9GZV5 400 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 ZNF703Q9H7S9 590 aaPredicted RBP13.6□□□□□ -0.23
NDE1-203ENST00000570727 DDX31Q9H8H2 851 aaKnown RBP13.6□□□□□ -0.23
NDE1-203ENST00000570727 ZFP64Q9NPA5 681 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 ACKR4Q9NPB9 350 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 ALKBH4Q9NXW9 302 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 PSD3Q9NYI0 1048 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 CNOT11Q9UKZ1 510 aaKnown RBP13.6□□□□□ -0.23
NDE1-203ENST00000570727 ERVK-19Q9WJR5 959 aa13.6□□□□□ -0.23
NDE1-203ENST00000570727 VPS13CQ709C8 3753 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 PRRC2AP48634 2157 aaKnown RBP13.59□□□□□ -0.23
NDE1-203ENST00000570727 NIPBLQ6KC79 2804 aaeCLIP13.59□□□□□ -0.23
NDE1-203ENST00000570727 MPDZO75970 2070 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 A0A1W2PS29 197 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 GLOD5A6NK44 160 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 SYCE1LA8MT33 242 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 H0YIV9 168 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 DYRK3O43781 588 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 STX2P32856 288 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 KCNJ2P63252 427 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 TBL3Q12788 808 aaKnown RBP13.59□□□□□ -0.23
NDE1-203ENST00000570727 NAB1Q13506 487 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 MROH9Q5TGP6 573 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 SEM1Q6ZVN7 128 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 CCDC25Q86WR0 208 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 MYLK4Q86YV6 388 aaPredicted RBP13.59□□□□□ -0.23
NDE1-203ENST00000570727 WDR20Q8TBZ3 569 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 NRGNQ92686 78 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 GPR78Q96P69 363 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 EXO5Q9H790 373 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 CNIH4Q9P003 139 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 UTP11Q9Y3A2 253 aaKnown RBP13.59□□□□□ -0.23
NDE1-203ENST00000570727 RNF11Q9Y3C5 154 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 L3MBTL1Q9Y468 752 aa13.59□□□□□ -0.23
NDE1-203ENST00000570727 PGRMC2O15173 223 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 LRATO95237 230 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 FAM58BPP0C7Q3 252 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 GABRA1P14867 456 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 SERPINB3P29508 390 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 DNAJA1P31689 397 aaKnown RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 GALNSP34059 522 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 BUD31P41223 144 aaPredicted RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 NEK2P51955 445 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 ALDH18A1P54886 795 aaKnown RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 CAV1Q03135 178 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 MYBPHQ13203 477 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 CUL3Q13618 768 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 ACAP2Q15057 778 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 EBPQ15125 230 aaKnown RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 PCBP2Q15366 365 aaKnown RBP eCLIP13.58□□□□□ -0.241e-6■■■□□ 14.7
NDE1-203ENST00000570727 NTRK2Q16620 822 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 CPSF6Q16630 551 aaKnown RBP eCLIP13.58□□□□□ -0.24
NDE1-203ENST00000570727 RIPPLY2Q5TAB7 128 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 TMEM64Q6YI46 380 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 RNF111Q6ZNA4 994 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 SLC29A4Q7RTT9 530 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 GOLGA7Q7Z5G4 137 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 TMEM200AQ86VY9 491 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 ULK2Q8IYT8 1036 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 DND1Q8IYX4 353 aaKnown RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 ZNF441Q8N8Z8 693 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 L3MBTL4Q8NA19 623 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 FAM13CQ8NE31 585 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 NEIL3Q8TAT5 605 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 RIT1Q92963 219 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 GAL3ST4Q96RP7 486 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 PELOQ9BRX2 385 aaKnown RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 CENPKQ9BS16 269 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 SLC6A15Q9H2J7 730 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 IPPKQ9H8X2 491 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 ACTR8Q9H981 624 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 RYDENQ9NUL5 291 aaKnown RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.58□□□□□ -0.24
NDE1-203ENST00000570727 LYARQ9NX58 379 aaKnown RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 QPCTLQ9NXS2 382 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 BOKQ9UMX3 212 aaPredicted RBP13.58□□□□□ -0.24
NDE1-203ENST00000570727 ANGPTL3Q9Y5C1 460 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 PCDHGB3Q9Y5G1 929 aa13.58□□□□□ -0.24
NDE1-203ENST00000570727 A0A087X1B8 175 aa13.57□□□□□ -0.24
NDE1-203ENST00000570727 CCDC189A1A4V9 331 aa13.57□□□□□ -0.24
NDE1-203ENST00000570727 ANKRD33BA6NCL7 494 aa13.57□□□□□ -0.24
NDE1-203ENST00000570727 OR6C76A6NM76 312 aa13.57□□□□□ -0.24
NDE1-203ENST00000570727 FOXE1O00358 373 aaPredicted RBP13.57□□□□□ -0.24
NDE1-203ENST00000570727 OR10H2O60403 315 aa13.57□□□□□ -0.24
NDE1-203ENST00000570727 UGDHO60701 494 aa13.57□□□□□ -0.24
NDE1-203ENST00000570727 TRIM3O75382 744 aaPredicted RBP13.57□□□□□ -0.24
NDE1-203ENST00000570727 KLHL2O95198 593 aa13.57□□□□□ -0.24
NDE1-203ENST00000570727 SIX3O95343 332 aaPredicted RBP13.57□□□□□ -0.24
NDE1-203ENST00000570727 AIFM1O95831 613 aa13.57□□□□□ -0.24
NDE1-203ENST00000570727 GBAP04062 536 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms