RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 AMZ1Q400G9 498 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 HP1BP3Q5SSJ5 553 aaPredicted RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 MEDAGQ5VYS4 303 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 HEPHL1Q6MZM0 1159 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 CD300LGQ6UXG3 332 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 HSDL2Q6YN16 418 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 IDO2Q6ZQW0 420 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 FAM122BQ7Z309 247 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 TFAP2DQ7Z6R9 452 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 TMEM25Q86YD3 366 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 CCDC197Q8NCU1 140 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 PRSS33Q8NF86 280 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 ART4Q93070 314 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 NTAN1Q96AB6 310 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 RASD2Q96D21 266 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 NUS1Q96E22 293 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 MYO19Q96H55 970 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 GPATCH2LQ9NWQ4 482 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 MKLN1Q9UL63 735 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 ST14Q9Y5Y6 855 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 HS3ST1O14792 307 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 AIM2O14862 343 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 PAPSS1O43252 624 aaPredicted RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 SLC2A1P11166 492 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 ITGB7P26010 798 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 PRDX6P30041 224 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 MZT1Q08AG7 82 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SF3A2Q15428 464 aaKnown RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 TYSND1Q2T9J0 566 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 TRIM16LQ309B1 348 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 ATG9BQ674R7 924 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SMIM15Q7Z3B0 74 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 LIMS2Q7Z4I7 341 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 MISPQ8IVT2 679 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 RCOR2Q8IZ40 523 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 LRRC17Q8N6Y2 441 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SLC35F5Q8WV83 523 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 CACNG8Q8WXS5 425 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 GTPBP3Q969Y2 492 aaKnown RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 RFT1Q96AA3 541 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 TMEM125Q96AQ2 219 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 KCNN2Q9H2S1 579 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 IL1RAPQ9NPH3 570 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 GIN1Q9NXP7 522 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 NLGN3Q9NZ94 848 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 A0A0A6YYJ9 748 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 TCRBV7S3A2A0A539 114 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 MAGEA13PA6NCF6 341 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SIGLEC16A6NMB1 481 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 HACD1B0YJ81 288 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 B4DGG1 531 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SLCO1B7G3V0H7 640 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 NR5A2O00482 541 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 IFNA16P05015 189 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 XRCC1P18887 633 aaPredicted RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 UGT1A6P19224 532 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 DYNLT1P63172 113 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 HSF2Q03933 536 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SLC29A2Q14542 456 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 INPP5AQ14642 412 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 LSM12Q3MHD2 195 aaKnown RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 PRSS36Q5K4E3 855 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 HLA-DQA1Q5Y7H0 255 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SLC22A10Q63ZE4 541 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SPESP1Q6UW49 350 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 C19orf35Q6ZS72 473 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 USP43Q70EL4 1123 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 ZDHHC21Q8IVQ6 265 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 UBE2J2Q8N2K1 259 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 DVL3Q92997 716 aaPredicted RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 FAF2Q96CS3 445 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 ABHD17AQ96GS6 310 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 KLHL32Q96NJ5 620 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 BBS4Q96RK4 519 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 TMEM121Q9BTD3 319 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 NDC1Q9BTX1 674 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 TM6SF2Q9BZW4 377 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SMG9Q9H0W8 520 aaKnown RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 YAE1D1Q9NRH1 226 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 RBM22Q9NW64 420 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMG1-217ENST00000569764 NUDT5Q9UKK9 219 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 CCL27Q9Y4X3 112 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 KCNE2Q9Y6J6 123 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 PTPRDP23468 1912 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 SCN5AQ14524 2016 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 VWA8A3KMH1 1905 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 hCG_1818297A0A087WSY0 165 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 TOR1AO14656 332 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 WBP4O75554 376 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 GP1BAP07359 652 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 OR4E1P0C645 316 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SRCP12931 536 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MIPP30301 263 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MMP12P39900 470 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ANXA11P50995 505 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 TPMTP51580 245 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ERVPABLB-1P60509 514 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 PSME3P61289 254 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 BNC1Q01954 994 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SCGB2A2Q13296 93 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms