RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 VITQ6UXI7 678 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 WDR53Q7Z5U6 358 aaPredicted RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 LINC01555Q8NAE3 123 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 TMEM145Q8NBT3 493 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PSD4Q8NDX1 1056 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 POP5Q969H6 163 aaKnown RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 YIPF6Q96EC8 236 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF347Q96SE7 839 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 INSM2Q96T92 566 aaPredicted RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 FAM83CQ9BQN1 747 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 QRSL1Q9H0R6 528 aaKnown RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 OR51E2Q9H255 320 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 DCSTAMPQ9H295 470 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 NMNAT1Q9HAN9 279 aaPredicted RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 HMG20AQ9NP66 347 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF226Q9NYT6 803 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 MAPRE3Q9UPY8 281 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PMF1-BGLAPU3KQ54 211 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PRUNE2Q8WUY3 3088 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 A0A1W2PS29 197 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 M0R3H8 397 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 SLC22A1O15245 554 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 B4GALT2O60909 372 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PTHP01270 115 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 IFNA14P01570 189 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 ANXA8P13928 327 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 ITGA2P17301 1181 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 EN2P19622 333 aaPredicted RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 DDCP20711 480 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 UQCRC2P22695 453 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 CNR2P34972 360 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 GJA4P35212 333 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 DRD3P35462 400 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 RPL3P39023 403 aaKnown RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 RAD52P43351 418 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 CCT3P49368 545 aaKnown RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 MAN2A2P49641 1150 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 FADDQ13158 208 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PDE7AQ13946 482 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PDGFRLQ15198 375 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PIP5KL1Q5T9C9 394 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 LCTLQ6UWM7 567 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 DSG4Q86SJ6 1040 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 YAF2Q8IY57 180 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 OR8K5Q8NH50 307 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 OR5K2Q8NHB8 316 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 OR14C36Q8NHC7 312 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 MCFD2Q8NI22 146 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF675Q8TD23 568 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 INTS12Q96CB8 462 aaKnown RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 METTL2AQ96IZ6 378 aaKnown RBP8.31□□□□□ -1.08
LINC00558-201ENST00000569422 FCRL4Q96PJ5 515 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 ITPAQ9BY32 194 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 WDR26Q9H7D7 661 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 CCNB1IP1Q9NPC3 277 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 ABCB10Q9NRK6 738 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 SEC14L3Q9UDX4 400 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 HCN2Q9UL51 889 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 ERGIC3Q9Y282 383 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 POFUT2Q9Y2G5 429 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 HCN4Q9Y3Q4 1203 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PCDHGA2Q9Y5H1 932 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 NINQ8N4C6 2090 aa8.31□□□□□ -1.08
LINC00558-201ENST00000569422 PNMA8CA0A1B0GUJ8 204 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 OR2A25A4D2G3 310 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CLCA1A8K7I4 914 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 RFXAPO00287 272 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 FFAR1O14842 300 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 TMEM127O75204 238 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 DNTTP04053 509 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ARAFP10398 606 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 NR2F1P10589 423 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CKMT1AP12532 417 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 BMP4P12644 408 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 HOXC12P31275 282 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 BSGP35613 385 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 TAS2R38P59533 333 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CXCR4P61073 352 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CD300CQ08708 224 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF846Q147U1 533 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ARMC8Q8IUR7 673 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 LACC1Q8IV20 430 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 IQCF1Q8N6M8 205 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 FBXO15Q8NCQ5 510 aaPredicted RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 B3GNT7Q8NFL0 401 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 RHOXF1Q8NHV9 184 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 HCAR2Q8TDS4 363 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 SETD7Q8WTS6 366 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CXorf40BQ96DE9 158 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 DACH2Q96NX9 599 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 RPP25Q9BUL9 199 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 SPATA9Q9BWV2 254 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 PLA2G2FQ9BZM2 168 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 EXOSC4Q9NPD3 245 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ZCCHC3Q9NUD5 404 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 DNAJC27Q9NZQ0 273 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ENPP4Q9Y6X5 453 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 HSPE1-MOB4S4R3N1 261 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 GON4LQ3T8J9 2241 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms