RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TLR1Q15399 786 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 PLEKHN1Q494U1 663 aaPredicted RBP11.93□□□□□ -0.5
CDT1-203ENST00000569140 ATG16L1Q676U5 607 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 IGFL3Q6UXB1 125 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 GALNT12Q8IXK2 581 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 OR6Y1Q8NGX8 325 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 CLHC1Q8NHS4 586 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 FAM76AQ8TAV0 307 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 GFM2Q969S9 779 aaKnown RBP11.93□□□□□ -0.5
CDT1-203ENST00000569140 TUBGCP3Q96CW5 907 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 PPP3R2Q96LZ3 170 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 TSSK3Q96PN8 268 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 GAL3ST4Q96RP7 486 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 UTP23Q9BRU9 249 aaKnown RBP11.93□□□□□ -0.5
CDT1-203ENST00000569140 C1orf50Q9BV19 199 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 ZNF223Q9UK11 482 aaPredicted RBP11.93□□□□□ -0.5
CDT1-203ENST00000569140 FAM208BQ5VWN6 2430 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 IGSF10Q6WRI0 2623 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 OR5H15A6NDH6 313 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 HRKO00198 91 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 WWP2O00308 870 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 LSM1O15116 133 aaKnown RBP11.92□□□□□ -0.5
CDT1-203ENST00000569140 AKAP10O43572 662 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 PRKNO60260 465 aaPredicted RBP11.92□□□□□ -0.5
CDT1-203ENST00000569140 SNUPNO95149 360 aaKnown RBP11.92□□□□□ -0.5
CDT1-203ENST00000569140 LRATO95237 230 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 KITP10721 976 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 DRD2P14416 443 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 MAPK1P28482 360 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 SLC18A1P54219 525 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 TLE1Q04724 770 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 UGT3A2Q3SY77 523 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 RFTN2Q52LD8 501 aaPredicted RBP11.92□□□□□ -0.5
CDT1-203ENST00000569140 H3F3CQ6NXT2 135 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 GALNT18Q6P9A2 607 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 IGFL2Q6UWQ7 119 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 RNF111Q6ZNA4 994 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 C16orf47Q6ZP98 133 aaPredicted RBP11.92□□□□□ -0.5
CDT1-203ENST00000569140 Q6ZSR9 355 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 SLC29A4Q7RTT9 530 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 TICAM1Q8IUC6 712 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 KIRREL3Q8IZU9 778 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 LRRC25Q8N386 305 aaPredicted RBP11.92□□□□□ -0.5
CDT1-203ENST00000569140 TMEM156Q8N614 296 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 FNDC5Q8NAU1 212 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 ADCY4Q8NFM4 1077 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 ZNF721Q8TF20 911 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 SENP5Q96HI0 755 aaPredicted RBP11.92□□□□□ -0.5
CDT1-203ENST00000569140 BBS4Q96RK4 519 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 SORT1Q99523 831 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 NPAS2Q99743 824 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 SH3GL2Q99962 352 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 C20orf27Q9GZN8 174 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 MANSC1Q9H8J5 431 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 MYNNQ9NPC7 610 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 KLHL1Q9NR64 748 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 PNPOQ9NVS9 261 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDT1-203ENST00000569140 MARCOQ9UEW3 520 aaPredicted RBP11.92□□□□□ -0.5
CDT1-203ENST00000569140 BCAP29Q9UHQ4 241 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 CCL27Q9Y4X3 112 aa11.92□□□□□ -0.5
CDT1-203ENST00000569140 CPAMD8Q8IZJ3 1885 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 ZFYVE26Q68DK2 2539 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 DOCK10Q96BY6 2186 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 TRAV17A0A0B4J275 112 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 ITGA10O75578 1167 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 SASH3O75995 380 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 SDC1P18827 310 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 DDCP20711 480 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 PRPH2P23942 346 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 NTSP30990 170 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 SSTR4P31391 388 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 TNFSF10P50591 281 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 SSR4P51571 173 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 GPR143P51810 404 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 MLF1P58340 268 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 RNF4P78317 190 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 TUBA3CQ13748 450 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 OR1C1Q15619 314 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 LTB4RQ15722 352 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 SPRED3Q2MJR0 410 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 PRR30Q53SZ7 412 aaPredicted RBP11.91□□□□□ -0.5
CDT1-203ENST00000569140 HLA-DQA1Q5Y7H0 255 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 TUBA3EQ6PEY2 450 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 Q6ZS92 163 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 RNF165Q6ZSG1 346 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 IKBIPQ70UQ0 350 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 CCDC116Q8IYX3 515 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 LGI4Q8N135 537 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 VWA5B2Q8N398 1253 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 LIX1Q8N485 282 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 OR5L2Q8NGL0 311 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 CPT1CQ8TCG5 803 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 ASB15Q8WXK1 588 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 HAS2Q92819 552 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 CNRIP1Q96F85 164 aaPredicted RBP11.91□□□□□ -0.5
CDT1-203ENST00000569140 FBXL20Q96IG2 436 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 EGLN2Q96KS0 407 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 C3orf30Q96M34 536 aa11.91□□□□□ -0.5
CDT1-203ENST00000569140 C5orf34Q96MH7 638 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms