RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 UBFD1O14562 309 aaKnown RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 HPGDSO60760 199 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 OAZ2O95190 189 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 RPS17P08708 135 aaKnown RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 RPS5P46782 204 aaKnown RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 BTN3A2P78410 334 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 DOC2AQ14183 400 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 LRRC26Q2I0M4 334 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 SLC22A10Q63ZE4 541 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CHCHD4Q8N4Q1 142 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 OR51A7Q8NH64 312 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 C1orf74Q96LT6 269 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 MRPS30Q9NP92 439 aaKnown RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 PCDHGB2Q9Y5G2 931 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CACNG2Q9Y698 323 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 PRNPP04156 253 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CTBP2P56545 445 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 GET4Q7L5D6 327 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 TMCO2Q7Z6W1 182 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 ZNF101Q8IZC7 436 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 SLC44A3Q8N4M1 653 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 SUSD3Q96L08 255 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 ZNF300Q96RE9 604 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CTRCQ99895 268 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 THAP7Q9BT49 309 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 ARHGAP39Q9C0H5 1083 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CENPMQ9NSP4 180 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 NDUFAF4Q9P032 175 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 RBPJLQ9UBG7 517 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 WDR45Q9Y484 360 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 COL18A1P39060 1754 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 GRXCR2A6NFK2 248 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 RBMXL2O75526 392 aaKnown RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 JUPP14923 745 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 JUNBP17275 347 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 NAA10P41227 235 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 PITPNBP48739 271 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 SELENOWP63302 87 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 PYHIN1Q6K0P9 492 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 FAM122CQ6P4D5 195 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 B3GNT9Q6UX72 402 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 GPR149Q86SP6 731 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 BOLLQ8N9W6 283 aaKnown RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 TRMT10AQ8TBZ6 339 aaKnown RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 PDLIM7Q9NR12 457 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 TMEM221A6NGB7 291 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TMX2-CTNND1H3BSU7 103 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 IFNA21P01568 189 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 CYP17A1P05093 508 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TAZQ16635 292 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 NADSYN1Q6IA69 706 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TRNP1Q6NT89 227 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 C3P1Q6ZMU1 363 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 FANK1Q8TC84 345 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 IL20RAQ9UHF4 553 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 ARFGEF2Q9Y6D5 1785 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 WASHC1A8K0Z3 465 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 F8W036 122 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 PFKMP08237 780 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 WASP42768 502 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 BLOC1S1P78537 153 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBPL2Q6SJ96 375 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 LAX1Q8IWV1 398 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TEX26Q8N6G2 289 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 AHCYL2Q96HN2 611 aaKnown RBP11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 C7orf50Q9BRJ6 194 aaKnown RBP11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 OR6C2Q9NZP2 312 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3DA0A087WVF3 549 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3IA0A087WXS9 549 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3EA0A087X179 549 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3KA0A087X1G2 549 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3FA6NER0 549 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 POM121CA8CG34 1229 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3LB9A6J9 549 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 ADAM23O75077 832 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 PDGFAP04085 211 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3HP0C7X1 549 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 GABRB3P28472 473 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 PIGAP37287 484 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 CDKN2CP42773 168 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 MAGEA3P43357 314 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 RGNQ15493 299 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TRAM1Q15629 374 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 INAVAQ3KP66 663 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 NDUFAF5Q5TEU4 345 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3GQ6DHY5 549 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3CQ6IPX1 549 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 MTFR2Q6P444 385 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 GDPD4Q6W3E5 623 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 C6orf120Q7Z4R8 191 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 TBC1D3Q8IZP1 549 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 SLC35B4Q969S0 331 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 FKBP10Q96AY3 582 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 CPNE2Q96FN4 548 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 EPYCQ99645 322 aa11.85□□□□□ -0.51
CSPG4P13-202ENST00000567704 NTN4Q9HB63 628 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms