RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 PDXPQ96GD0 296 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 HYLS1Q96M11 299 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 C2orf49Q9BVC5 232 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 TMEM121BQ9BXQ6 578 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 HDHD5Q9BXW7 423 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 POLR2J3Q9H1A7 115 aaKnown RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 FGF20Q9NP95 211 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 MCUBQ9NWR8 336 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 NLKQ9UBE8 527 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 YARS2Q9Y2Z4 477 aaKnown RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 HSPB11Q9Y547 144 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 CLCA3PQ9Y6N3 262 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 HELZP42694 1942 aaKnown RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 TRAV19A0A0A6YYK7 116 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 TMEM129A0AVI4 362 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 LINC00862A6NCI5 91 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 H3BN98 237 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 SLC30A4O14863 429 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 PRKYO43930 277 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 SEMA7AO75326 666 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 KLHL18O94889 574 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 IGSF6O95976 241 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 LHCGRP22888 699 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 UQCRC1P31930 480 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 EVX1P49640 407 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 EFNB1P98172 346 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 MC1RQ01726 317 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 FOXD4Q12950 439 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 PRSS53Q2L4Q9 553 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 SYT14P1Q58G82 188 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 ZDHHC20Q5W0Z9 365 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 LHX8Q68G74 356 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 TCTN3Q6NUS6 607 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 FUT10Q6P4F1 479 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 ZNF782Q6ZMW2 699 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 AMIGO1Q86WK6 493 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 SYT14Q8NB59 555 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 TM9SF4Q92544 642 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 MTERF3Q96E29 417 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 TEFMQ96QE5 360 aaKnown RBP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 DCLRE1CQ96SD1 692 aaKnown RBP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 BRD9Q9H8M2 597 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 MYNNQ9NPC7 610 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 WBP1LQ9NX94 342 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 TRPM5Q9NZQ8 1165 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 EIF3KQ9UBQ5 218 aaKnown RBP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 SLC23A1Q9UHI7 598 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 TEKT2Q9UIF3 430 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 GSTK1Q9Y2Q3 226 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 AUP1Q9Y679 476 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 SGTAO43765 313 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 OR10H3O60404 316 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 UBL4AP11441 157 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 CDH18Q13634 790 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 DUSP6Q16828 381 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 KLHL22Q53GT1 634 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 ABI3BPQ7Z7G0 1075 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 RNF180Q86T96 592 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 C16orf78Q8WTQ4 265 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 ECHDC3Q96DC8 303 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 C1GALT1C1Q96EU7 318 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 ZNF582Q96NG8 517 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 RSPO3Q9BXY4 272 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 MRPL39Q9NYK5 338 aaKnown RBP14.89□□□□□ -0.03
COMMD4-215ENST00000566843 TVP23BQ9NYZ1 205 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 COMMD3Q9UBI1 195 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 ACAD8Q9UKU7 415 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 CDH10Q9Y6N8 788 aa14.89□□□□□ -0.03
COMMD4-215ENST00000566843 SMLR1H3BR10 107 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 H1F0P07305 194 aaKnown RBP14.88□□□□□ -0.03
COMMD4-215ENST00000566843 CST5P28325 142 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-215ENST00000566843 GABRA5P31644 462 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 BTG1P62324 171 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 C2orf80Q0P641 193 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 P2RY14Q15391 338 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 CRTC2Q53ET0 693 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-215ENST00000566843 MED27Q6P2C8 311 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 CD300LDQ6UXZ3 194 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 SLCO4C1Q6ZQN7 724 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 COMMD6Q7Z4G1 85 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 ASZ1Q8WWH4 475 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 AKAP1Q92667 903 aaKnown RBP eCLIP14.88□□□□□ -0.03
COMMD4-215ENST00000566843 GPR137Q96N19 417 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 COQ7Q99807 217 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 ATF6BQ99941 703 aa14.88□□□□□ -0.03
COMMD4-215ENST00000566843 TRDV1A0A1B0GX56 115 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 A0A1W2PRB8 838 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 OR5K3A6NET4 321 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 FOXE1O00358 373 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-215ENST00000566843 TLX2O43763 284 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-215ENST00000566843 HPGDSO60760 199 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 NR2F6P10588 404 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 HK1P19367 917 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 UQCRC2P22695 453 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 HLA-FP30511 346 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 MAPK12P53778 367 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 PRMT2P55345 433 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 FABP5Q01469 135 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 MRPL28Q13084 256 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms