RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NMBRP28336 390 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SEC13P55735 322 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RRAS2P62070 204 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 RPA4Q13156 261 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PFKFB4Q16877 469 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SMTNL2Q2TAL5 461 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TTLL9Q3SXZ7 439 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 NBPF12Q5TAG4 269 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 CPZQ66K79 652 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 LCLAT1Q6UWP7 414 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 C1orf174Q8IYL3 243 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 STK40Q8N2I9 435 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SLC37A3Q8NCC5 494 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 REPS2Q8NFH8 660 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 OR8D4Q8NGM9 314 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TRMT2BQ96GJ1 504 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 ITCHQ96J02 903 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 QRFPRQ96P65 431 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 AP1S3Q96PC3 154 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 NT5C1AQ9BXI3 368 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ARHGAP39Q9C0H5 1083 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CFAP20Q9Y6A4 193 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 C17orf113A0A1B0GUU1 675 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 HSBP1L1C9JCN9 74 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PRRG1O14668 218 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PDCD5O14737 125 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PCDHGA12O60330 932 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RLN2P04090 185 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 S100A8P05109 93 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 THP07101 528 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ADRB1P08588 477 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SBK2P0C263 348 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CMPK1P30085 196 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SRP9P49458 86 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 AP3S2P59780 193 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 EEF1A1P68104 462 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 EEF1A2Q05639 463 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 DPYSL2Q16555 572 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TEX30Q5JUR7 227 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZNF678Q5SXM1 525 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FAM102AQ5T9C2 384 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 EEF1A1P5Q5VTE0 462 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZNF675Q8TD23 568 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ADAMTS14Q8WXS8 1223 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 UCN3Q969E3 161 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TMEM203Q969S6 136 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 KCNJ15Q99712 375 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 MRI1Q9BV20 369 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RAB11FIP5Q9BXF6 653 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TMPRSS13Q9BYE2 586 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 HIPK2Q9H2X6 1198 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 B3GAT2Q9NPZ5 323 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ACTR10Q9NZ32 417 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 LRFN1Q9P244 771 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 NLKQ9UBE8 527 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 NOP16Q9Y3C1 178 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 AHDC1Q5TGY3 1603 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZNF729A6NN14 1252 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 GREM1O60565 184 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CPB1P15086 417 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 EPCAMP16422 314 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TPH1P17752 444 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CYP2F1P24903 491 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CHRNA5P30532 468 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 HOXA13P31271 388 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 CRISP3P54108 245 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ITGA1P56199 1179 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RAB10P61026 200 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 STXBP1P61764 594 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 TMEM41BQ5BJD5 291 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RNLSQ5VYX0 342 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FUT10Q6P4F1 479 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GDPGP1Q6ZNW5 385 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ARHGAP36Q6ZRI8 547 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SHFQ7M4L6 423 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GALNT5Q7Z7M9 940 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 OR2L3Q8NG85 312 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SARGQ9BW04 601 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SLC28A3Q9HAS3 691 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ABI3Q9P2A4 366 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CTSFQ9UBX1 484 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 DICER1Q9UPY3 1922 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 TRABD2BA6NFA1 517 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SMLR1H3BR10 107 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 MMP20O60882 483 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 APRTP07741 180 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FBP1P09467 338 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 EDN3P14138 238 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TRHRP34981 398 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 GGT2P36268 569 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TBX4P57082 545 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 BEX3Q00994 111 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SRSF11Q05519 484 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 CDH18Q13634 790 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 VMACQ2NL98 169 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZNF667Q5HYK9 610 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RIPPLY2Q5TAB7 128 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FAM171A1Q5VUB5 890 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PTCHD4Q6ZW05 846 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 USP53Q70EK8 1073 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms