RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CTNSO60931 367 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 CLDN6P56747 220 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 ABHD18Q0P651 414 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 TRIM25Q14258 630 aaKnown RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 SLC38A9Q8NBW4 561 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 OR9A2Q8NGT5 310 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 WDR60Q8WVS4 1066 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 ASB9Q96DX5 294 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 FAM120BQ96EK7 910 aaKnown RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 DEPDC7Q96QD5 511 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 SLC39A1Q9NY26 324 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 CPNE3O75131 537 aaKnown RBP17.6■□□□□ 0.41
COMMD4-213ENST00000565834 KRT75O95678 551 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 C1QCP02747 245 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 GPX2P18283 190 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 IL10P22301 178 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 PTGER1P34995 402 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 CCT3P49368 545 aaKnown RBP17.6■□□□□ 0.41
COMMD4-213ENST00000565834 HSD17B7P56937 341 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 STX4Q12846 297 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 BNIP2Q12982 314 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 KPNB1Q14974 876 aaKnown RBP17.6■□□□□ 0.41
COMMD4-213ENST00000565834 GPR155Q7Z3F1 870 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 LIN37Q96GY3 246 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-213ENST00000565834 ZNF583Q96ND8 569 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 RAD21L1Q9H4I0 556 aa17.6■□□□□ 0.41
COMMD4-213ENST00000565834 MKKSQ9NPJ1 570 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-213ENST00000565834 GVINP1Q7Z2Y8 2422 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 JRKO75564 520 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 BTG2P78543 158 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 MS4A2Q01362 244 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 LTB4RQ15722 352 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 HES3Q5TGS1 186 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 TMEM107Q6UX40 140 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 CEACAM20Q6UY09 585 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 TMEM64Q6YI46 380 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 MED25Q71SY5 747 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 RAB11FIP2Q7L804 512 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 SLCO6A1Q86UG4 719 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 OR2T12Q8NG77 320 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 SFXN5Q8TD22 340 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 NEURL3Q96EH8 262 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 PCDHAC1Q9H158 963 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 LANCL2Q9NS86 450 aa17.59■□□□□ 0.41
COMMD4-213ENST00000565834 MYOCOSA0A1B0GUC4 107 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 FAM220BPB1ANY3 271 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 BMP10O95393 424 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 STAMBPO95630 424 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 ATP1B1P05026 303 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 SLC35E2P0CK97 266 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 ITIH1P19827 911 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 HTR1EP28566 365 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 RAB15P59190 212 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 DCDP81605 110 aaKnown RBP17.58■□□□□ 0.41
COMMD4-213ENST00000565834 NHLH1Q02575 133 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 VAC14Q08AM6 782 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 TRAP1Q12931 704 aaKnown RBP17.58■□□□□ 0.41
COMMD4-213ENST00000565834 FLOT2Q14254 428 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 RGNQ15493 299 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 CYP51A1Q16850 503 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 NKAIN1Q4KMZ8 207 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.58■□□□□ 0.41
COMMD4-213ENST00000565834 MFSD4BQ5TF39 518 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 SAXO2Q658L1 398 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 COX15Q7KZN9 410 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 SZRD1Q7Z422 152 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 SERPINA11Q86U17 422 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 CALHM3Q86XJ0 350 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 ZC3H7AQ8IWR0 971 aaKnown RBP17.58■□□□□ 0.41
COMMD4-213ENST00000565834 C10orf111Q8N326 155 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 ADCY4Q8NFM4 1077 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 TNIP2Q8NFZ5 429 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 OR52N2Q8NGI0 321 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 MOAP1Q96BY2 351 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 MAGED4Q96JG8 741 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 TMEM121BQ9BXQ6 578 aaPredicted RBP17.58■□□□□ 0.41
COMMD4-213ENST00000565834 EPS8L2Q9H6S3 715 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 ZCCHC3Q9NUD5 404 aaKnown RBP17.58■□□□□ 0.41
COMMD4-213ENST00000565834 USP22Q9UPT9 525 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 MMACHCQ9Y4U1 282 aa17.58■□□□□ 0.41
COMMD4-213ENST00000565834 SPAARA0A1B0GVQ0 90 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 ACOT8O14734 319 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 OR10H2O60403 315 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 FTH1P19P0C7X4 201 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 CSRP1P21291 193 aaKnown RBP17.58■□□□□ 0.4
COMMD4-213ENST00000565834 MAOAP21397 527 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 NT5EP21589 574 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 MC3RP41968 323 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 CRATP43155 626 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 GZMMP51124 257 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 OR4D2P58180 307 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 ACTR3P61158 418 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 IGLV3-21P80748 117 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-213ENST00000565834 PRR5P85299 388 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 FADDQ13158 208 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 TP53BP2Q13625 1128 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 ZNF385CQ66K41 422 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-213ENST00000565834 CPZQ66K79 652 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 BHLHB9Q6PI77 547 aa17.58■□□□□ 0.4
COMMD4-213ENST00000565834 RNF130Q86XS8 419 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms