RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ADAP2Q9NPF8 381 aa7.3□□□□□ -1.24
CDH1-208ENST00000565810 NECTIN3Q9NQS3 549 aa7.3□□□□□ -1.24
CDH1-208ENST00000565810 PNO1Q9NRX1 252 aaKnown RBP7.3□□□□□ -1.24
CDH1-208ENST00000565810 BTNL2Q9UIR0 455 aa7.3□□□□□ -1.24
CDH1-208ENST00000565810 PCDHGA6Q9Y5G7 932 aa7.3□□□□□ -1.24
CDH1-208ENST00000565810 CLCA3PQ9Y6N3 262 aa7.3□□□□□ -1.24
CDH1-208ENST00000565810 IGKV3D-11A0A0A0MRZ8 115 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 MYOCOSA0A1B0GUC4 107 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 TCRBV16S1A1N1A0A5B0 115 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 CCT8L1PA6NM43 557 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 A8MUA0 341 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 CAPN14A8MX76 684 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 C17orf105B2RV13 164 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 EBAG9O00559 213 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 RRP8O43159 456 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 ERN1O75460 977 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 CREG1O75629 220 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 SNRNP200O75643 2136 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 BCAS2O75934 225 aaPredicted RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 KCNH1O95259 989 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 C6orf47O95873 294 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 ATP1B1P05026 303 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 ABCB1P08183 1280 aaPredicted RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 ESRRAP11474 423 aaPredicted RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 CAPN3P20807 821 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 CALB2P22676 271 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 MMP11P24347 488 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 OTX2P32243 289 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 FRKP42685 505 aaPredicted RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 TRPC1P48995 793 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 PGDP52209 483 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 WNT3P56703 355 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 RPS18P62269 152 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 IGLV3-21P80748 117 aaPredicted RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 HSPB3Q12988 150 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 ELAVL1Q15717 326 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 ZNF750Q32MQ0 723 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 SPDYE7PQ495Y7 208 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 COQ5Q5HYK3 327 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 BHLHB9Q6PI77 547 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 TMEM205Q6UW68 189 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 ZNF621Q6ZSS3 439 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 CPEB2Q7Z5Q1 589 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 ANKRD37Q7Z713 158 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 ANKRD46Q86W74 232 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 TREML1Q86YW5 311 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 GALNT12Q8IXK2 581 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 POU5F2Q8N7G0 328 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 ZSCAN1Q8NBB4 408 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 OR9A2Q8NGT5 310 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 OR14A16Q8NHC5 309 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 SNIP1Q8TAD8 396 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 NUDT8Q8WV74 236 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 PPWD1Q96BP3 646 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 MOAP1Q96BY2 351 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 NAF1Q96HR8 494 aaKnown RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 NSL1Q96IY1 281 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 SLC45A3Q96JT2 553 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 CCDC115Q96NT0 180 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 AMDHD1Q96NU7 426 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 PANX1Q96RD7 426 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 C3orf14Q9HBI5 128 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDH1-208ENST00000565810 GID8Q9NWU2 228 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 TAS2R9Q9NYW1 312 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.29□□□□□ -1.24
CDH1-208ENST00000565810 DKK4Q9UBT3 224 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 TAGLN3Q9UI15 199 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 VPS4AQ9UN37 437 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 SNX8Q9Y5X2 465 aa7.29□□□□□ -1.24
CDH1-208ENST00000565810 LOC102723996A0A087X1L8 192 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 TGFBR3LH3BV60 316 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 PLOD2O00469 737 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 MRASO14807 208 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 AIM2O14862 343 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 KLK10O43240 276 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 SCN2BO60939 215 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 COQ9O75208 318 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 ATP5HO75947 161 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 NPPAP01160 153 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 UMODP07911 640 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 ICAM2P13598 275 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 LIFP15018 202 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 EFNA1P20827 205 aaPredicted RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 F8A1P23610 371 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 SOAT1P35610 550 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 ZFP36L2P47974 494 aaKnown RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 FOXL2P58012 376 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 HBA1P69905 142 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 PHC1P78364 1004 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 MXRA7P84157 204 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 PRR5P85299 388 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 EEF1A2Q05639 463 aaKnown RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 MAP4K2Q12851 820 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 CLN3Q13286 438 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 NFYCQ13952 458 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 ZNF267Q14586 743 aaPredicted RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 TLR1Q15399 786 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 PRSS53Q2L4Q9 553 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms