RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RAB15P59190 212 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 PSME3P61289 254 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 CAPRIN1Q14444 709 aaKnown RBP10.42□□□□□ -0.74
SF3B3-205ENST00000564899 LRIF1Q5T3J3 769 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 CEACAM20Q6UY09 585 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 DLEU7Q6UYE1 221 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 ASRGL1Q7L266 308 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 PRICKLE2Q7Z3G6 844 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 SAMD14Q8IZD0 417 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-205ENST00000564899 DEFB107AQ8IZN7 70 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 PGAM4Q8N0Y7 254 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 EXD3Q8N9H8 876 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 TMEM52Q8NDY8 209 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 DNAJB8Q8NHS0 232 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 ZFP28Q8NHY6 868 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 DNAJB14Q8TBM8 379 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 OR5P2Q8WZ92 322 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 TANKQ92844 425 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 PMEPA1Q969W9 287 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 TBC1D20Q96BZ9 403 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 ZBED6CLQ96FA7 236 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-205ENST00000564899 PANX1Q96RD7 426 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 BBS4Q96RK4 519 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 SLC39A3Q9BRY0 314 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 PAIP1Q9H074 479 aaKnown RBP10.42□□□□□ -0.74
SF3B3-205ENST00000564899 SLAMF7Q9NQ25 335 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 SLAMF8Q9P0V8 285 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 TRPC4Q9UBN4 977 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-205ENST00000564899 PISDQ9UG56 409 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 PCDHGB4Q9UN71 923 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 MAP4K5Q9Y4K4 846 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF780BQ9Y6R6 833 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 NOTCH2Q04721 2471 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 USP9YO00507 2555 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 C15orf38-AP3S2A0A0A6YYH1 394 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 MYO1GB0I1T2 1018 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ANKRD65E5RJM6 399 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 CLDN4O14493 209 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 PLD2O14939 933 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 NVLO15381 856 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 FGF17O60258 216 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 B4GALT2O60909 372 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 DNAJC8O75937 253 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 GSNP06396 782 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ABCB1P08183 1280 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 C8orf89P0DMQ9 161 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 CSNK2A2P19784 350 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 PPP2R1BP30154 601 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 FEN1P39748 380 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 FRKP42685 505 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 NCBP2P52298 156 aaKnown RBP eCLIP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 MANFP55145 182 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 DCDP81605 110 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ID2Q02363 134 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 FOLH1Q04609 750 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 VAC14Q08AM6 782 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ABHD18Q0P651 414 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 SRSF6Q13247 344 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF750Q32MQ0 723 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 GTDC1Q4AE62 458 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 NKAIN1Q4KMZ8 207 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 DCAF12Q5T6F0 453 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 C8orf82Q6P1X6 216 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 BNC2Q6ZN30 1099 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF621Q6ZSS3 439 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ARPINQ7Z6K5 226 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 OR4N5Q8IXE1 308 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF595Q8IYB9 648 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 SLC38A9Q8NBW4 561 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 OR4K14Q8NGD5 310 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 WDR36Q8NI36 951 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 SNRNP27Q8WVK2 155 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 KCNE4Q8WWG9 221 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 MCUR1Q96AQ8 359 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 CNRIP1Q96F85 164 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 WBP1Q96G27 269 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 OR1F2PQ96R84 312 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 CGREF1Q99674 301 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 HOPXQ9BPY8 73 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 GPATCH1Q9BRR8 931 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 CADM1Q9BY67 442 aaKnown RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 GLIPR2Q9H4G4 154 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 NEUROD4Q9HD90 331 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 PRTFDC1Q9NRG1 225 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 ACSS1Q9NUB1 689 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-205ENST00000564899 VPS4AQ9UN37 437 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 PCDHGA7Q9Y5G6 932 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 MYO9AB2RTY4 2548 aa10.41□□□□□ -0.74
SF3B3-205ENST00000564899 TRBV5-3A0A0A0MS03 114 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 A0A1W2PS29 197 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 GSC2O15499 205 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 EFSO43281 561 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 LDB3O75112 727 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 JRKO75564 520 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 CDC123O75794 336 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 DXOO77932 396 aaKnown RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 GPR75O95800 540 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF28P17035 718 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms