RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZAR1LA6NP61 321 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 POM121CA8CG34 1229 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 H3BN98 237 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 CASKO14936 926 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 KPNA5O15131 536 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 IL1AP01583 271 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 HMGA1P17096 107 aaKnown RBP15.48■□□□□ 0.07
LINC00554-201ENST00000564841 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
LINC00554-201ENST00000564841 SRP54P61011 504 aaKnown RBP15.48■□□□□ 0.07
LINC00554-201ENST00000564841 BCL2L1Q07817 233 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 KCNC3Q14003 757 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 TAF1AQ15573 450 aaPredicted RBP15.48■□□□□ 0.07
LINC00554-201ENST00000564841 SHEQ5VZ18 495 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 IL20RBQ6UXL0 311 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 CEACAM20Q6UY09 585 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 GHDCQ8N2G8 530 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 TMEM175Q9BSA9 504 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 GPR63Q9BZJ6 419 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 PPA2Q9H2U2 334 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 DIMT1Q9UNQ2 313 aaKnown RBP15.48■□□□□ 0.07
LINC00554-201ENST00000564841 STC2O76061 302 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 RHOCP08134 193 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 RRASP10301 218 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 SOX18P35713 384 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 PRMT2P55345 433 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 FABP5Q01469 135 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 CSTF1Q05048 431 aaKnown RBP15.47■□□□□ 0.07
LINC00554-201ENST00000564841 RGNQ15493 299 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 TMEM91Q6ZNR0 172 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 TPGS1Q6ZTW0 290 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 LRRC17Q8N6Y2 441 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 KCTD7Q96MP8 289 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 FAM126AQ9BYI3 521 aaPredicted RBP15.47■□□□□ 0.07
LINC00554-201ENST00000564841 NUDT15Q9NV35 164 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 GPATCH2Q9NW75 528 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 PRUNE2Q8WUY3 3088 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 DOCK4Q8N1I0 1966 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 IGLV3-10A0A075B6K4 115 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 TRBV4-1A0A0J9YWV2 114 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 QSOX1O00391 747 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 BET1O15155 118 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 TRIM3O75382 744 aaPredicted RBP15.47■□□□□ 0.07
LINC00554-201ENST00000564841 PROS1P07225 676 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 EBLN1P0CF75 366 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 STK19P49842 368 aaPredicted RBP15.47■□□□□ 0.07
LINC00554-201ENST00000564841 CLVS2Q5SYC1 327 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 CCNJQ5T5M9 372 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 FAM180BQ6P0A1 224 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 BHLHB9Q6PI77 547 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 MEX3DQ86XN8 651 aaKnown RBP15.47■□□□□ 0.07
LINC00554-201ENST00000564841 OR6M1Q8NGM8 313 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 VWCEQ96DN2 955 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 MTERF1Q99551 399 aaKnown RBP15.47■□□□□ 0.07
LINC00554-201ENST00000564841 PDFQ9HBH1 243 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 WASH6PQ9NQA3 447 aa15.47■□□□□ 0.07
LINC00554-201ENST00000564841 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.46■□□□□ 0.07
LINC00554-201ENST00000564841 C2orf92A0A1B0GVN3 265 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 GSAPA4D1B5 854 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 ANKRD66B4E2M5 251 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 STK16O75716 305 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 RGS11O94810 467 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 GADD45GO95257 159 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 CKMP06732 381 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 CLTBP09497 229 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 ACSM4P0C7M7 580 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 BPIP17213 487 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 HOXB6P17509 224 aaKnown RBP15.46■□□□□ 0.07
LINC00554-201ENST00000564841 ITPKAP23677 461 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00554-201ENST00000564841 ZNF177Q13360 481 aaPredicted RBP15.46■□□□□ 0.07
LINC00554-201ENST00000564841 MS4A15Q8N5U1 240 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 NFKBIDQ8NI38 313 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 AP2M1Q96CW1 435 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 ZC3HAV1LQ96H79 300 aaKnown RBP15.46■□□□□ 0.07
LINC00554-201ENST00000564841 MND1Q9BWT6 205 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 SAP130Q9H0E3 1048 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 HCN1O60741 890 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 HSDL2Q6YN16 418 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 ANKRD33Q7Z3H0 272 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 ADGRG2Q8IZP9 1017 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 STPG2Q8N412 459 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 FAM46DQ8NEK8 389 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 TTLQ8NG68 377 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 OR4K1Q8NGD4 311 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 OR5AK3PQ8NH89 298 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 UCN3Q969E3 161 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 P2RY12Q9H244 342 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 SLC9A8Q9Y2E8 581 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 PCDHB11Q9Y5F2 797 aa15.46■□□□□ 0.07
LINC00554-201ENST00000564841 DRGXA6NNA5 263 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 EPOP01588 193 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 CXCL10P02778 98 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 SOD2P04179 222 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 AMD1P17707 334 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 LSM11P83369 360 aaKnown RBP eCLIP15.46■□□□□ 0.06
LINC00554-201ENST00000564841 CNKSR3Q6P9H4 555 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 GDPGP1Q6ZNW5 385 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 GPR155Q7Z3F1 870 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 LINC00518Q8N0U6 118 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms