RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 KLRB1Q12918 225 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 SMU1Q2TAY7 513 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 ACER2Q5QJU3 275 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 IL23RQ5VWK5 629 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 B3GNTL1Q67FW5 361 aaPredicted RBP14.9□□□□□ -0.02
RAB40C-208ENST00000564703 FAM71E1Q6IPT2 247 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 H3F3CQ6NXT2 135 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 IGFL3Q6UXB1 125 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 HSDL2Q6YN16 418 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 PTRH1Q86Y79 214 aaKnown RBP14.9□□□□□ -0.02
RAB40C-208ENST00000564703 MMP21Q8N119 569 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 OR5L2Q8NGL0 311 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 OR1N1Q8NGS0 311 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 PIWIL2Q8TC59 973 aaKnown RBP14.9□□□□□ -0.02
RAB40C-208ENST00000564703 SLC2A12Q8TD20 617 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 TSSK3Q96PN8 268 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 BBS4Q96RK4 519 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 CNPPD1Q9BV87 410 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 SEMA4CQ9C0C4 833 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 CDCP1Q9H5V8 836 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 SLC35C2Q9NQQ7 365 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 MARCOQ9UEW3 520 aaPredicted RBP14.9□□□□□ -0.02
RAB40C-208ENST00000564703 BAIAP2L1Q9UHR4 511 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 CNTRLQ7Z7A1 2325 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 LAMA5O15230 3695 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 FCHO1O14526 889 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 BCKDHAP12694 445 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 LBPP18428 481 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 SDC1P18827 310 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 RPL3P39023 403 aaKnown RBP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 ARG2P78540 354 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 EMX2Q04743 252 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 FCRLBQ6BAA4 426 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 R3HCC1LQ7Z5L2 792 aaKnown RBP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 TICAM1Q8IUC6 712 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 WDR75Q8IWA0 830 aaKnown RBP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 GALNT12Q8IXK2 581 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 CCDC116Q8IYX3 515 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 LRRC25Q8N386 305 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 KIF2BQ8N4N8 673 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 APCDD1LQ8NCL9 501 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 GFM2Q969S9 779 aaKnown RBP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 EGLN2Q96KS0 407 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 MAGEB18Q96M61 343 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 PRPF18Q99633 342 aaKnown RBP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 BRINP2Q9C0B6 783 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 AKTIPQ9H8T0 292 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 TAS2R7Q9NYW3 318 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 NOP53Q9NZM5 478 aaKnown RBP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 GIMAP2Q9UG22 337 aa14.89□□□□□ -0.03
RAB40C-208ENST00000564703 TNRC6AQ8NDV7 1962 aaKnown RBP14.89□□□□□ -0.03
RAB40C-208ENST00000564703 AKAP10O43572 662 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 LRATO95237 230 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 DDAH2O95865 285 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 PDGFAP04085 211 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 TACR1P25103 407 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 CASRP41180 1078 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 GPR143P51810 404 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 ERVK-8P63133 956 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 C19orf57Q0VDD7 668 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 SPRED3Q2MJR0 410 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 ZNF750Q32MQ0 723 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 FAM9CQ8IZT9 166 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 LGI4Q8N135 537 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 LIX1Q8N485 282 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 AMER2Q8N7J2 671 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 OR8K3Q8NH51 312 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 SUN3Q8TAQ9 357 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 ZNF721Q8TF20 911 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 THAP3Q8WTV1 239 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-208ENST00000564703 CKAP2Q8WWK9 683 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 HAS2Q92819 552 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 PPCDCQ96CD2 204 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 MTERF3Q96E29 417 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 CNRIP1Q96F85 164 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-208ENST00000564703 FBXL20Q96IG2 436 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 FCRL1Q96LA6 429 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 C7orf26Q96N11 449 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 C1orf50Q9BV19 199 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 MFRPQ9BY79 579 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.88□□□□□ -0.037e-7■■■□□ 14.8
RAB40C-208ENST00000564703 REEP4Q9H6H4 257 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 MEAF6Q9HAF1 191 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 CXorf21Q9HAI6 301 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 SH3BP4Q9P0V3 963 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 ANAPC2Q9UJX6 822 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 MAPRE3Q9UPY8 281 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 ERVK-19Q9WJR5 959 aa14.88□□□□□ -0.03
RAB40C-208ENST00000564703 CDK2AP1O14519 115 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 ATP1B1P05026 303 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 JUNP05412 331 aaKnown RBP14.87□□□□□ -0.03
RAB40C-208ENST00000564703 PCSK2P16519 638 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 NTSP30990 170 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 SOX11P35716 441 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 HPCAL1P37235 193 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 MAP4K2Q12851 820 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 HLA-DQA1Q5Y7H0 255 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 NXNQ6DKJ4 435 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 FAM180BQ6P0A1 224 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms