RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 TMEM121BQ9BXQ6 578 aaPredicted RBP25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 ARL8BQ9NVJ2 186 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 HS3ST3B1Q9Y662 390 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 ZFHX4Q86UP3 3567 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 A0A1W2PRB8 838 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 ABCB1P08183 1280 aaPredicted RBP25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 CD63P08962 238 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 WT1P19544 449 aaPredicted RBP25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 STT3AP46977 705 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 EEF1A2Q05639 463 aaKnown RBP25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 TLR1Q15399 786 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 TMEM205Q6UW68 189 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 CCDC86Q9H6F5 360 aaKnown RBP25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 ANKRA2Q9H9E1 313 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 MRGBPQ9NV56 204 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 TMEM45AQ9NWC5 275 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 FAM120CQ9NX05 1096 aaKnown RBP25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 KCND3Q9UK17 655 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 PCDHGA6Q9Y5G7 932 aa25.26■■□□□ 1.63
SH3GL3-205ENST00000563901 FBP2O00757 339 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 CPSF4O95639 269 aaKnown RBP25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 CT62P0C5K7 136 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 SLC35E2P0CK97 266 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 COX4I1P13073 169 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 NT5EP21589 574 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 CDKN2CP42773 168 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 CDK9P50750 372 aaKnown RBP25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 MANFP55145 182 aaKnown RBP25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 OR4D2P58180 307 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 MRPS35P82673 323 aaKnown RBP25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 SERTAD2Q14140 314 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 SFT2D3Q587I9 215 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 PAGE3Q5JUK9 113 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 DNAJC14Q6Y2X3 702 aaPredicted RBP25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 TRPM8Q7Z2W7 1104 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 PPP1R32Q7Z5V6 425 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 RETREG3Q86VR2 466 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 ST13P4Q8IZP2 240 aaPredicted RBP25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 KCNE4Q8WWG9 221 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 KAT2AQ92830 837 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 ZBED6CLQ96FA7 236 aaPredicted RBP25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 SERHLQ9NQF3 203 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 SEMA3GQ9NS98 782 aa25.25■■□□□ 1.63
SH3GL3-205ENST00000563901 HRKO00198 91 aa25.24■■□□□ 1.63
SH3GL3-205ENST00000563901 CFLARO15519 480 aa25.24■■□□□ 1.63
SH3GL3-205ENST00000563901 SOX18P35713 384 aa25.24■■□□□ 1.63
SH3GL3-205ENST00000563901 CPZQ66K79 652 aa25.24■■□□□ 1.63
SH3GL3-205ENST00000563901 FAM111BQ6SJ93 734 aa25.24■■□□□ 1.63
SH3GL3-205ENST00000563901 SIMC1Q8NDZ2 872 aa25.24■■□□□ 1.63
SH3GL3-205ENST00000563901 RBM18Q96H35 190 aaKnown RBP25.24■■□□□ 1.63
SH3GL3-205ENST00000563901 PRSS51A0A1B0GVH4 220 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 A0A1W2PP18 115 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 RNASET2O00584 256 aaKnown RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 ATP1B1P05026 303 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 DDX5P17844 614 aaKnown RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 MMP11P24347 488 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 MPIP34949 423 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 HBA1P69905 142 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 CYLC2Q14093 348 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 MAPKAPK3Q16644 382 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 ANXA8L1Q5VT79 327 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 CLEC4FQ8N1N0 589 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 ZNF248Q8NDW4 579 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 SNIP1Q8TAD8 396 aaKnown RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 PTPMT1Q8WUK0 201 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 NPAS2Q99743 824 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 SLC6A13Q9NSD5 602 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 ACSS1Q9NUB1 689 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 C17orf105B2RV13 164 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 SOCS6O14544 535 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 KLK10O43240 276 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 CREG1O75629 220 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 CBX6O95503 412 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 GSNP06396 782 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 TNNI3P19429 210 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 CPA2P48052 419 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 PGDP52209 483 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 ATP1A1-AS1Q5TC04 95 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 FAM91A1Q658Y4 838 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 TMEM107Q6UX40 140 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 CPEB2Q7Z5Q1 589 aaKnown RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 SAMD14Q8IZD0 417 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 OR4A15Q8NGL6 344 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 MAGED4Q96JG8 741 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 WDR77Q9BQA1 342 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 SLC25A23Q9BV35 468 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 TRIM4Q9C037 500 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 ADAP2Q9NPF8 381 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 SIRT3Q9NTG7 399 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 SLAMF8Q9P0V8 285 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 NDUFAF1Q9Y375 327 aa25.23■■□□□ 1.63
SH3GL3-205ENST00000563901 C1QTNF9BB2RNN3 333 aa25.22■■□□□ 1.63
SH3GL3-205ENST00000563901 MASP2O00187 686 aa25.22■■□□□ 1.63
SH3GL3-205ENST00000563901 ANGPT2O15123 496 aa25.22■■□□□ 1.63
SH3GL3-205ENST00000563901 SEC24DO94855 1032 aaPredicted RBP25.22■■□□□ 1.63
SH3GL3-205ENST00000563901 C1QCP02747 245 aa25.22■■□□□ 1.63
SH3GL3-205ENST00000563901 C1QTNF9P0C862 333 aa25.22■■□□□ 1.63
SH3GL3-205ENST00000563901 MGAT2Q10469 447 aa25.22■■□□□ 1.63
SH3GL3-205ENST00000563901 SSPNQ14714 243 aa25.22■■□□□ 1.63
SH3GL3-205ENST00000563901 MAPRE2Q15555 327 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms