RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 GRK1Q15835 563 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 AANATQ16613 207 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TIGD6Q17RP2 521 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 HKDC1Q2TB90 917 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 BTBD16Q32M84 506 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SETMARQ53H47 684 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 Q5BKY6 102 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 XKR3Q5GH77 459 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ZNF667Q5HYK9 610 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ZNF678Q5SXM1 525 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 LCN1P1Q5VSP4 162 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CACHD1Q5VU97 1274 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ATG9BQ674R7 924 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SFRP4Q6FHJ7 346 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 JADE1Q6IE81 842 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 LAYNQ6UX15 382 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 HSDL2Q6YN16 418 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TMPRSS11AQ6ZMR5 421 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PLEKHM3Q6ZWE6 761 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RRM2BQ7LG56 351 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 OVCH2Q7RTZ1 564 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TECPR1Q7Z6L1 1165 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ZBTB46Q86UZ6 589 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 GALNT16Q8N428 558 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CLDN22Q8N7P3 220 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 YIPF7Q8N8F6 280 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ZNF540Q8NDQ6 660 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SOCS4Q8WXH5 440 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TESCQ96BS2 214 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 R3HDM4Q96D70 268 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 MVB12AQ96EY5 273 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 P2RY11Q96G91 374 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 FAM167AQ96KS9 214 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TSGA13Q96PP4 275 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ERVK-6Q9BXR3 956 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 POLR3FQ9H1D9 316 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PORCNQ9H237 461 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ACTR8Q9H981 624 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TCF7L1Q9HCS4 588 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RANGRFQ9HD47 186 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 WDR6Q9NNW5 1121 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ENTPD7Q9NQZ7 604 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 HEBP1Q9NRV9 189 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PLSCR3Q9NRY6 295 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SETD4Q9NVD3 440 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CNOT2Q9NZN8 540 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CYTH4Q9UIA0 394 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 GMEB2Q9UKD1 530 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 KLHL20Q9Y2M5 609 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 MED16Q9Y2X0 877 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 AAR2Q9Y312 384 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 GMPPBQ9Y5P6 360 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CROCCQ5TZA2 2017 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 DICER1Q9UPY3 1922 aaKnown RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 A0A1B0GVI7 797 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 TMEM233B4DJY2 109 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 PTGES3LE9PB15 166 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 M0QYV0 167 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 MYL12BO14950 172 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 KPNA5O15131 536 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 HS6ST1O60243 411 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 MPZL2O60487 215 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 SCN2BO60939 215 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 SNAPINO95295 136 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 LDOC1O95751 146 aaPredicted RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 FADS2O95864 444 aaKnown RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 ECDO95905 644 aaPredicted RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 RAF1P04049 648 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 ICAM1P05362 532 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 PRKAR1AP10644 381 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 PIPP12273 146 aaPredicted RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 GLULP15104 373 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 CD19P15391 556 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 MYL12AP19105 171 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 BDNFP23560 247 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 GADD45AP24522 165 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 PRKAR1BP31321 381 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 PTGER1P34995 402 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 ARL2P36404 184 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 PIGAP37287 484 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 MAP2K4P45985 399 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 GMPSP49915 693 aaPredicted RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 RORCP51449 518 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 TPMTP51580 245 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 POLR2JP52435 117 aaKnown RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 CLDN20P56880 219 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 RAB14P61106 215 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 RRAS2P62070 204 aaPredicted RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 GBE1Q04446 702 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 RUNX1T1Q06455 604 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 FOXD4Q12950 439 aaPredicted RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 CSTF3Q12996 717 aaKnown RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 PRKG2Q13237 762 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 ITPK1Q13572 414 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 GNA13Q14344 377 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 MXD4Q14582 209 aaPredicted RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 GLYR1Q49A26 553 aaPredicted RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 VPS26BQ4G0F5 336 aa3.34□□□□□ -1.87
LINC01416-201ENST00000563553 RNASE12Q5GAN4 147 aaKnown RBP3.34□□□□□ -1.87
LINC01416-201ENST00000563553 XKR7Q5GH72 579 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms