RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 BIVMQ86UB2 503 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 GPR180Q86V85 440 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 KIF18BQ86Y91 864 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 PM20D2Q8IYS1 436 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 OR7G3Q8NG95 312 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 HSPBAP1Q96EW2 488 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 ZNF597Q96LX8 424 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 JSRP1Q96MG2 331 aaPredicted RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 GAL3ST4Q96RP7 486 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 TIMP4Q99727 224 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 WWTR1Q9GZV5 400 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 PRDM14Q9GZV8 571 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 CAB39LQ9H9S4 337 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 TRMT1Q9NXH9 659 aaKnown RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 ADGRE2Q9UHX3 823 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 MTO1Q9Y2Z2 717 aaKnown RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 TUBAL3A6NHL2 446 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 OR6C76A6NM76 312 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 ATE1O95260 518 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 S100BP04271 92 aaPredicted RBP17.13■□□□□ 0.33
NME3-204ENST00000563498 EPXP11678 715 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 PCNAP12004 261 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 GDF1P27539 372 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 SLC37A1P57057 533 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 EBPQ15125 230 aaKnown RBP17.13■□□□□ 0.33
NME3-204ENST00000563498 DEFB113Q30KQ7 82 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 NSUN5P2Q63ZY6 315 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 TMEM198Q66K66 360 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 RNF111Q6ZNA4 994 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 TAGAPQ8N103 731 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 ZCCHC7Q8N3Z6 543 aaKnown RBP17.13■□□□□ 0.33
NME3-204ENST00000563498 RGMAQ96B86 450 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 UBXN10Q96LJ8 280 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 SMYD2Q9NRG4 433 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 RNF112Q9ULX5 631 aa17.13■□□□□ 0.33
NME3-204ENST00000563498 CAPN14A8MX76 684 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 SAP18O00422 153 aaKnown RBP17.12■□□□□ 0.33
NME3-204ENST00000563498 TP53I11O14683 189 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 PHGDHO43175 533 aaKnown RBP17.12■□□□□ 0.33
NME3-204ENST00000563498 SH3BGRLO75368 114 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 HPNP05981 417 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 STMN1P16949 149 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 TCP1P17987 556 aaKnown RBP17.12■□□□□ 0.33
NME3-204ENST00000563498 GALNSP34059 522 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 BUD31P41223 144 aaPredicted RBP17.12■□□□□ 0.33
NME3-204ENST00000563498 ZNF136P52737 540 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 HERVK_113P63132 956 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 ERVK-8P63133 956 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 SORDQ00796 357 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 ZKSCAN8Q15776 578 aaPredicted RBP17.12■□□□□ 0.33
NME3-204ENST00000563498 NHSL2Q5HYW2 709 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 DIO2Q92813 273 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 RIT1Q92963 219 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 SECISBP2Q96T21 854 aaKnown RBP17.12■□□□□ 0.33
NME3-204ENST00000563498 GPR22Q99680 433 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 CENPKQ9BS16 269 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 SORBS1Q9BX66 1292 aaKnown RBP17.12■□□□□ 0.33
NME3-204ENST00000563498 ERVK-6Q9BXR3 956 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 OR51B5Q9H339 312 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 UBQLN3Q9H347 655 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 PRM3Q9NNZ6 103 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 ERVK-19Q9WJR5 959 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 TSC22D4Q9Y3Q8 395 aa17.12■□□□□ 0.33
NME3-204ENST00000563498 CD8B2A6NJW9 211 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 SNX4O95219 450 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 GPR75O95800 540 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 PIK3CBP42338 1070 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 RPL21P46778 160 aaKnown RBP17.11■□□□□ 0.33
NME3-204ENST00000563498 CDK9P50750 372 aaKnown RBP17.11■□□□□ 0.33
NME3-204ENST00000563498 RAP1GDS1P52306 607 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 WNT3P56703 355 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 KEAP1Q14145 624 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 ZNF267Q14586 743 aaPredicted RBP17.11■□□□□ 0.33
NME3-204ENST00000563498 RPS6KA2Q15349 733 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 FBXW10Q5XX13 1052 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 C18orf63Q68DL7 685 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 VASNQ6EMK4 673 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 KLHL7Q8IXQ5 586 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 ZBED8Q8IZ13 594 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 ZNF441Q8N8Z8 693 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 STAG3L4Q8TBR4 150 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 UBTD2Q8WUN7 234 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 CDKL2Q92772 493 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 TP53INP1Q96A56 240 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 CPNE1Q99829 537 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 PLEKHF2Q9H8W4 249 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 NUDT4Q9NZJ9 180 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 TXNDC16Q9P2K2 825 aa17.11■□□□□ 0.33
NME3-204ENST00000563498 MBD3L4A6NDZ8 208 aaPredicted RBP17.1■□□□□ 0.33
NME3-204ENST00000563498 MBD3L3A6NE82 208 aaPredicted RBP17.1■□□□□ 0.33
NME3-204ENST00000563498 MBD3L5A6NJ08 208 aaPredicted RBP17.1■□□□□ 0.33
NME3-204ENST00000563498 KDM4EB2RXH2 506 aaPredicted RBP17.1■□□□□ 0.33
NME3-204ENST00000563498 K7EPI3 171 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 PLPP1O14494 284 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 OR10H2O60403 315 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 PIAS1O75925 651 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 LRATO95237 230 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 IL18BPO95998 194 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 CLPSP04118 112 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 OPRM1P35372 400 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms