RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 IFNA14P01570 189 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 C9P02748 559 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 IFI6P09912 130 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 RAP2AP10114 183 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 FASP25445 335 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 CRATP43155 626 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 PRIM2P49643 509 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 GZMMP51124 257 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 MAPK10P53779 464 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 HSD11B2P80365 405 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 PRR5P85299 388 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 CHRNB3Q05901 458 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 HSPB3Q12988 150 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 SRSF5Q13243 272 aaKnown RBP9.15□□□□□ -0.94
UBFD1-202ENST00000563366 GAB1Q13480 694 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 SQSTM1Q13501 440 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 FAM53BQ14153 422 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 GNA13Q14344 377 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 SHBQ15464 509 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 TRIP10Q15642 601 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 CEBPEQ15744 281 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 ZNF630Q2M218 657 aaPredicted RBP9.15□□□□□ -0.94
UBFD1-202ENST00000563366 MPEG1Q2M385 716 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 HLA-BQ31612 363 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 LCE2CQ5TA81 110 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 C20orf204Q6ZNR8 217 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 FAM92BQ6ZTR7 304 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 KANSL1Q7Z3B3 1105 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 PRSS42Q7Z5A4 293 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 DNAJC22Q8N4W6 341 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 METTL25Q8N6Q8 603 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 TTC29Q8NA56 475 aaPredicted RBP9.15□□□□□ -0.94
UBFD1-202ENST00000563366 ADCY4Q8NFM4 1077 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 OR56A1Q8NGH5 318 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 ZNF417Q8TAU3 575 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 SAP25Q8TEE9 199 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 CANT1Q8WVQ1 401 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 TANKQ92844 425 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 NEURL3Q96EH8 262 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 MVB12AQ96EY5 273 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 ZNF285Q96NJ3 590 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 AMDHD1Q96NU7 426 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 ZNF587Q96SQ5 575 aaPredicted RBP9.15□□□□□ -0.94
UBFD1-202ENST00000563366 ZNF184Q99676 751 aaPredicted RBP9.15□□□□□ -0.94
UBFD1-202ENST00000563366 MACROD1Q9BQ69 325 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 KLHL4Q9C0H6 718 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 KLHL25Q9H0H3 589 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 PIF1Q9H611 641 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 GAREM1Q9H706 876 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 RPF2Q9H7B2 306 aaKnown RBP9.15□□□□□ -0.94
UBFD1-202ENST00000563366 FANCEQ9HB96 536 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 C3orf14Q9HBI5 128 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 CAPN10Q9HC96 672 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 SEMA5BQ9P283 1151 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 GPN3Q9UHW5 284 aaPredicted RBP9.15□□□□□ -0.94
UBFD1-202ENST00000563366 RIMS3Q9UJD0 308 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 FAF1Q9UNN5 650 aaPredicted RBP9.15□□□□□ -0.94
UBFD1-202ENST00000563366 AURKCQ9UQB9 309 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 PCDHGA5Q9Y5G8 931 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 SNX8Q9Y5X2 465 aa9.15□□□□□ -0.94
UBFD1-202ENST00000563366 KMT2EQ8IZD2 1858 aa9.15□□□□□ -0.95
UBFD1-202ENST00000563366 ADAMTS20P59510 1910 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ADAMTS9Q9P2N4 1935 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 LOC105369274A0A096LPK9 316 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 LOC102723532A0A0G2JNH3 316 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 PCDHGA12O60330 932 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 DEAF1O75398 565 aaPredicted RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ERAL1O75616 437 aaKnown RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 NSA2O95478 260 aaKnown RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 B3GALT4O96024 378 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 STATHP02808 62 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 NTRK1P04629 796 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 FHP07954 510 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 SP9P0CG40 484 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 GIMD1P0DJR0 217 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 NCK1P16333 377 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 PCGF2P35227 344 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 AVPR1BP47901 424 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 HSPA13P48723 471 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 DUSP3P51452 185 aaPredicted RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 NCBP2P52298 156 aaKnown RBP eCLIP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 LIM2P55344 173 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 PPP1CAP62136 330 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 BNC1Q01954 994 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 GRM7Q14831 915 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 PRTGQ2VWP7 1150 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 FAM214AQ32MH5 1076 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 CMPK2Q5EBM0 449 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 GCNT6Q5T4J0 391 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 OGFRL1Q5TC84 451 aaPredicted RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 YOD1Q5VVQ6 348 aaPredicted RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 SAXO2Q658L1 398 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ZC3H14Q6PJT7 736 aaKnown RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 LYPD4Q6UWN0 246 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ERMP1Q7Z2K6 904 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 SPRED1Q7Z699 444 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ZZZ3Q8IYH5 903 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ADGRG5Q8IZF4 528 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 OR4N4Q8N0Y3 316 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms