RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 GATA6Q92908 595 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 TBC1D20Q96BZ9 403 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 CENPNQ96H22 339 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-208ENST00000563220 SEMA3GQ9NS98 782 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 IRAK4Q9NWZ3 460 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 GMEB2Q9UKD1 530 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 ATXN7L1Q9ULK2 861 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-208ENST00000563220 SPACA6W5XKT8 324 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 MYOCOSA0A1B0GUC4 107 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 FGF17O60258 216 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 LDB3O75112 727 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 ZNF682O95780 498 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 ZNF26P17031 533 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-208ENST00000563220 CKMT2P17540 419 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 PRKAG1P54619 331 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 CDK6Q00534 326 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 FOLH1Q04609 750 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 FAM53BQ14153 422 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 ATP6AP1Q15904 470 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 SZRD1Q7Z422 152 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 LRRC25Q8N386 305 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-208ENST00000563220 D2HGDHQ8N465 521 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 TTC29Q8NA56 475 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-208ENST00000563220 KAT2AQ92830 837 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 RAB8BQ92930 207 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 EME1Q96AY2 570 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 ELP4Q96EB1 424 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 SLC41A2Q96JW4 573 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 COQ10BQ9H8M1 238 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 ANKRA2Q9H9E1 313 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 SAMD4AQ9UPU9 718 aaKnown RBP16.97■□□□□ 0.31
COMMD4-208ENST00000563220 CLCA2Q9UQC9 943 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 TTC28Q96AY4 2481 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 MAGEA13PA6NCF6 341 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 TMEM229AB2RXF0 380 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 HMGN4O00479 90 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 CER1O95813 267 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 FOLR1P15328 257 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 ARL4DP49703 201 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 ZNF630Q2M218 657 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-208ENST00000563220 INAVAQ3KP66 663 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 TMTC4Q5T4D3 741 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 GARNL3Q5VVW2 1013 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 TMEM154Q6P9G4 183 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 ZNF574Q6ZN55 896 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-208ENST00000563220 EIF3MQ7L2H7 374 aaKnown RBP16.97■□□□□ 0.31
COMMD4-208ENST00000563220 PRSS42Q7Z5A4 293 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 SFXN5Q8TD22 340 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 COL26A1Q96A83 441 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 SLC29A1Q99808 456 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 CIB1Q99828 191 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 GTPBP2Q9BX10 602 aaKnown RBP16.97■□□□□ 0.31
COMMD4-208ENST00000563220 MAGIXQ9H6Y5 334 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 HCN3Q9P1Z3 774 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 SCOCQ9UIL1 159 aa16.97■□□□□ 0.31
COMMD4-208ENST00000563220 SPTBP11277 2137 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 A0A1W2PQM1 296 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 DPPA5A6NC42 116 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 SAC3D1A6NKF1 404 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 CLOCKO15516 846 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 NSA2O95478 260 aaKnown RBP16.96■□□□□ 0.31
COMMD4-208ENST00000563220 LINGO3P0C6S8 592 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 CPMP14384 443 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 SOX18P35713 384 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 MC3RP41968 323 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 CCL7P80098 99 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 MAT1AQ00266 395 aaKnown RBP16.96■□□□□ 0.31
COMMD4-208ENST00000563220 SQSTM1Q13501 440 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 VTCN1Q7Z7D3 282 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 SAMD14Q8IZD0 417 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-208ENST00000563220 GALNT4Q8N4A0 578 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 CATSPER1Q8NEC5 780 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 SLC35G5Q96KT7 338 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 NTN4Q9HB63 628 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 RPS6KA6Q9UK32 745 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 TMEM184BQ9Y519 407 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-208ENST00000563220 RP1P56715 2156 aa16.96■□□□□ 0.31
COMMD4-208ENST00000563220 WDFY4Q6ZS81 3184 aa16.96■□□□□ 0.3
COMMD4-208ENST00000563220 ADAMTS9Q9P2N4 1935 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 TMEM150CB9EJG8 249 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 EMC8O43402 210 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 GPR75O95800 540 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 LDLRP01130 860 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 OR12D1P0DN82 309 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 PORP16435 677 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 NELFEP18615 380 aaKnown RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 MATN1P21941 496 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 MYBPC3Q14896 1274 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 MAPK11Q15759 364 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 TMEM71Q6P5X7 295 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 CCDC80Q76M96 950 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 EPHX4Q8IUS5 362 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 OR5D16Q8NGK9 328 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 SLC38A5Q8WUX1 472 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 TANKQ92844 425 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 POP5Q969H6 163 aaKnown RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 ANKRD9Q96BM1 317 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 C16orf58Q96GQ5 468 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 YIPF4Q9BSR8 244 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 ARRDC1-AS1Q9H2J1 176 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms