RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SLCO2A1Q92959 643 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 RAB7BQ96AH8 199 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 TRIM44Q96DX7 344 aaPredicted RBP2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 RAB3CQ96E17 227 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 RBM18Q96H35 190 aaKnown RBP2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 POM121L2Q96KW2 1035 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 TTC25Q96NG3 672 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF300Q96RE9 604 aaPredicted RBP2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 S1PR3Q99500 378 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 SYT15Q9BQS2 421 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 ERP44Q9BS26 406 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF416Q9BWM5 594 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 FTHL17Q9BXU8 183 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 ATG10Q9H0Y0 220 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 GTSE1Q9NYZ3 720 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 CHRNA9Q9UGM1 479 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 MGAT4BQ9UQ53 548 aa2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 EXOGQ9Y2C4 368 aaKnown RBP2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.76□□□□□ -1.97
SHCBP1-202ENST00000563219 FAM230AA0A1W2PPH8 454 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 OR5H15A6NDH6 313 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 ERI2A8K979 691 aaKnown RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 H0YCG3 227 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 K7ERI5 159 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 SURF4O15260 269 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 PRAMEF12O95522 483 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 HIST1H2AGP0C0S8 130 aaPredicted RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 MBL2P11226 248 aaPredicted RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 KRT3P12035 628 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 PRG2P13727 222 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 MYOGP15173 224 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 GLRA1P23415 457 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 MMP12P39900 470 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 PRPHP41219 470 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 MTIF2P46199 727 aaKnown RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 GSCP56915 257 aaPredicted RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 RPL27P61353 136 aaKnown RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 IRX1P78414 480 aaPredicted RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 DHODHQ02127 395 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 HSF2Q03933 536 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 FUT7Q11130 342 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 SCGB2A2Q13296 93 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 PDIA5Q14554 519 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 OR1C1Q15619 314 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 MAJINQ3KP22 176 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 WLSQ5T9L3 541 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 IL23RQ5VWK5 629 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 HIST2H2AA3Q6FI13 130 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 NEPROQ6NW34 567 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 FAAP20Q6NZ36 180 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 STEAP1BQ6NZ63 245 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 ARSKQ6UWY0 536 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 CYP4V2Q6ZWL3 525 aaPredicted RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 KRTAP7-1Q8IUC3 87 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 UNC5CLQ8IV45 518 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 OR9Q2Q8NGE9 314 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 OR5T2Q8NGG2 359 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 HIST1H2ACQ93077 130 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 CCDC51Q96ER9 411 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 C14orf79Q96F83 325 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 CNRIP1Q96F85 164 aaPredicted RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 NSMCE3Q96MG7 304 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 USP28Q96RU2 1077 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 CBWD1Q9BRT8 395 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 CCM2Q9BSQ5 444 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 PAPOLGQ9BWT3 736 aaKnown RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 HOXD1Q9GZZ0 328 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 GFRA4Q9GZZ7 299 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 ECT2Q9H8V3 914 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 VIPAS39Q9H9C1 493 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 TEX10Q9NXF1 929 aaPredicted RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 GDAP2Q9NXN4 497 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 RDH8Q9NYR8 311 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 ASIC3Q9UHC3 531 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 SNX6Q9UNH7 406 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 SLC6A5Q9Y345 797 aa2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 MRPS2Q9Y399 296 aaKnown RBP2.75□□□□□ -1.97
SHCBP1-202ENST00000563219 RAD54L2Q9Y4B4 1467 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 IGLV7-46A0A075B6I9 117 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ANKRD30BLA7E2S9 258 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 NEDD8-MDP1E9PL57 170 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 CHADO15335 359 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF749O43361 778 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 TLX2O43763 284 aaPredicted RBP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 KIAA0513O60268 411 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 DUSP11O75319 330 aaKnown RBP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 TOM1L1O75674 476 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 APBB3O95704 486 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ANGPTL1O95841 491 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF883P0CG24 379 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 CALCBP10092 127 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 RRASP10301 218 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 CD1DP15813 335 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ATP6V1C1P21283 382 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 IL4RP24394 825 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 PSMA5P28066 241 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ABCE1P61221 599 aaKnown RBP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 RPS27AP62979 156 aaKnown RBP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 CYCSP99999 105 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms