RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 GIMAP2Q9UG22 337 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 TP53TG5Q9Y2B4 290 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 ZNF451Q9Y4E5 1061 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 PRRC2CQ9Y520 2896 aaKnown RBP12.5□□□□□ -0.41
CDH1-204ENST00000562118 MYO1GB0I1T2 1018 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 C17orf105B2RV13 164 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 ANKRD28O15084 1053 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 C1QL1O75973 258 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 PRPS2P11908 318 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 PORP16435 677 aaPredicted RBP12.5□□□□□ -0.41
CDH1-204ENST00000562118 PCSK2P16519 638 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 ITGA3P26006 1051 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 PIK3R1P27986 724 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 MAPK1P28482 360 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 ASMTP46597 345 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 XKP51811 444 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 ACTN3Q08043 901 aaPredicted RBP12.5□□□□□ -0.41
CDH1-204ENST00000562118 MAP4K2Q12851 820 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 MAD2L1Q13257 205 aaPredicted RBP12.5□□□□□ -0.41
CDH1-204ENST00000562118 LY6DQ14210 128 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 MPEG1Q2M385 716 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 PRICKLE4Q2TBC4 344 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 LACTB2Q53H82 288 aaPredicted RBP12.5□□□□□ -0.41
CDH1-204ENST00000562118 AGAP7PQ5VUJ5 663 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 WDR75Q8IWA0 830 aaKnown RBP12.5□□□□□ -0.41
CDH1-204ENST00000562118 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 LRRC8CQ8TDW0 803 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 ACTRT2Q8TDY3 377 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 NCLNQ969V3 563 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 AGAP4Q96P64 663 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 DGAT2Q96PD7 388 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 ARHGAP9Q9BRR9 750 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 NUF2Q9BZD4 464 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 SLCO1B3Q9NPD5 702 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 SLC35C2Q9NQQ7 365 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 PNO1Q9NRX1 252 aaKnown RBP12.5□□□□□ -0.41
CDH1-204ENST00000562118 ATP6V1HQ9UI12 483 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 UTS2RQ9UKP6 389 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 PSME2Q9UL46 239 aa12.5□□□□□ -0.41
CDH1-204ENST00000562118 TRPC5OSA6NMA1 111 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 PEX11AO75192 247 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 SLITRK5O94991 958 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 TGDSO95455 350 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 ALPPP05187 535 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 COX7A2P14406 83 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 CSNK2A2P19784 350 aaPredicted RBP12.49□□□□□ -0.41
CDH1-204ENST00000562118 TRHRP34981 398 aaPredicted RBP12.49□□□□□ -0.41
CDH1-204ENST00000562118 MRPL19P49406 292 aaKnown RBP12.49□□□□□ -0.41
CDH1-204ENST00000562118 CLCN2P51788 898 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 PGDP52209 483 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 SLC37A1P57057 533 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 ZNF750Q32MQ0 723 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 GALNTL6Q49A17 601 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 ZNF628Q5EBL2 1059 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 ISLR2Q6UXK2 745 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 ARFGAP2Q8N6H7 521 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 RBMXL3Q8N7X1 1067 aaKnown RBP12.49□□□□□ -0.41
CDH1-204ENST00000562118 ZNF321PQ8N8H1 164 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 ZNF615Q8N8J6 731 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 ZNF441Q8N8Z8 693 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 NUBPLQ8TB37 319 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 SLC39A7Q92504 469 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 HAS2Q92819 552 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 KLHL29Q96CT2 875 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 TUBGCP3Q96CW5 907 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 RBM18Q96H35 190 aaKnown RBP12.49□□□□□ -0.41
CDH1-204ENST00000562118 SENP5Q96HI0 755 aaPredicted RBP12.49□□□□□ -0.41
CDH1-204ENST00000562118 ART5Q96L15 291 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 BRINP2Q9C0B6 783 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 REEP4Q9H6H4 257 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 ZBTB20Q9HC78 741 aaPredicted RBP12.49□□□□□ -0.41
CDH1-204ENST00000562118 PRM3Q9NNZ6 103 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 SLAMF7Q9NQ25 335 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 MAT2BQ9NZL9 334 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 NOP53Q9NZM5 478 aaKnown RBP12.49□□□□□ -0.41
CDH1-204ENST00000562118 CLCA3PQ9Y6N3 262 aa12.49□□□□□ -0.41
CDH1-204ENST00000562118 A6NL46 340 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 OR6C76A6NM76 312 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 HRKO00198 91 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 PRKNO60260 465 aaPredicted RBP12.48□□□□□ -0.41
CDH1-204ENST00000562118 PSMG1O95456 288 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 ALDOCP09972 364 aaKnown RBP12.48□□□□□ -0.41
CDH1-204ENST00000562118 CT62P0C5K7 136 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 CD97P48960 835 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 CLDN8P56748 225 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 MLF1P58340 268 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 C2orf80Q0P641 193 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 DUSP8Q13202 625 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 PTGR1Q14914 329 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 MLC1Q15049 377 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 ZNF385BQ569K4 471 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 FHL5Q5TD97 284 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 IL23RQ5VWK5 629 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 EPGNQ6UW88 154 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 Q6ZS92 163 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 TICAM1Q8IUC6 712 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 CRLF3Q8IUI8 442 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 GALNT12Q8IXK2 581 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 C9orf40Q8IXQ3 194 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 LRRC25Q8N386 305 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms