RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 REEP3Q6NUK4 255 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 CD300LDQ6UXZ3 194 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 ZNF852Q6ZMS4 543 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 METTL3Q86U44 580 aaKnown RBP17.72■□□□□ 0.43
BBS4-204ENST00000562084 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
BBS4-204ENST00000562084 SLC37A3Q8NCC5 494 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 APOBEC4Q8WW27 367 aaKnown RBP17.72■□□□□ 0.43
BBS4-204ENST00000562084 OMA1Q96E52 524 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 WRAP53Q9BUR4 548 aaKnown RBP17.72■□□□□ 0.43
BBS4-204ENST00000562084 POLR2J3Q9H1A7 115 aaKnown RBP17.72■□□□□ 0.43
BBS4-204ENST00000562084 NARFLQ9H6Q4 476 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 ZSCAN32Q9NX65 697 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 PRKAG2Q9UGJ0 569 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 SLC23A1Q9UHI7 598 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 EXOSC1Q9Y3B2 195 aaKnown RBP17.72■□□□□ 0.43
BBS4-204ENST00000562084 NUP214P35658 2090 aaPredicted RBP17.72■□□□□ 0.43
BBS4-204ENST00000562084 LTBP2Q14767 1821 aa17.72■□□□□ 0.43
BBS4-204ENST00000562084 TRBV4-1A0A0J9YWV2 114 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 H3BN98 237 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 BET1O15155 118 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 LATS1O95835 1130 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 C6orf47O95873 294 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 SYN1P17600 705 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 DGKGP49619 791 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 SNRPD2P62316 118 aaKnown RBP17.71■□□□□ 0.43
BBS4-204ENST00000562084 B4GALNT1Q00973 533 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 RAB40BQ12829 278 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 DSG2Q14126 1118 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 ATAT1Q5SQI0 421 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 RETSATQ6NUM9 610 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 TCEANCQ8N8B7 351 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 OR8H1Q8NGG4 311 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.71■□□□□ 0.43
BBS4-204ENST00000562084 PPCDCQ96CD2 204 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 C1GALT1C1Q96EU7 318 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 ATG10Q9H0Y0 220 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 EMC7Q9NPA0 242 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 OR51B4Q9Y5P0 310 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 RNF215Q9Y6U7 377 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 E7EQ34 232 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 QSOX1O00391 747 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 RECKO95980 971 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 LHCGRP22888 699 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 ELAVL4P26378 380 aaKnown RBP17.71■□□□□ 0.43
BBS4-204ENST00000562084 RGS19P49795 217 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 ATP12AP54707 1039 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 DSTNP60981 165 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 ADAM15Q13444 863 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 IL18Q14116 193 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 COL28A1Q2UY09 1125 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 CRTC2Q53ET0 693 aaPredicted RBP17.71■□□□□ 0.43
BBS4-204ENST00000562084 ZNF385BQ569K4 471 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 GRAMD2AQ8IUY3 354 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 UBE2J2Q8N2K1 259 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 GPR26Q8NDV2 337 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 OR52P1PQ8NH57 321 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 ACOT12Q8WYK0 555 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 MAT2BQ9NZL9 334 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 EXO1Q9UQ84 846 aaKnown RBP17.71■□□□□ 0.43
BBS4-204ENST00000562084 CLCA3PQ9Y6N3 262 aa17.71■□□□□ 0.43
BBS4-204ENST00000562084 CEP290O15078 2479 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 FFAR1O14842 300 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 SH3BP5O60239 455 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 OR10H3O60404 316 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 H1F0P07305 194 aaKnown RBP17.7■□□□□ 0.42
BBS4-204ENST00000562084 ZNF8P17098 575 aaPredicted RBP17.7■□□□□ 0.42
BBS4-204ENST00000562084 SSTR4P31391 388 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 ETV5P41161 510 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 ETV1P50549 477 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 ARPP19P56211 112 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 RGS1Q08116 209 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 SEC23BQ15437 767 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 ANKRD54Q6NXT1 300 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 TEX261Q6UWH6 196 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 CEACAM20Q6UY09 585 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 TPRG1Q6ZUI0 275 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 ANKS3Q6ZW76 656 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 TRILQ7L0X0 811 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 GLRX5Q86SX6 157 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 FBXL6Q8N531 539 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 LRRC17Q8N6Y2 441 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 MYNNQ9NPC7 610 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 COMMD3Q9UBI1 195 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 PRG3Q9Y2Y8 225 aaPredicted RBP17.7■□□□□ 0.42
BBS4-204ENST00000562084 U3KQ87 197 aa17.7■□□□□ 0.42
BBS4-204ENST00000562084 H7C4K7 107 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 CASKO14936 926 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 COCHO43405 550 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 PRKYO43930 277 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 GJB5O95377 273 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 FURINP09958 794 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 MAPK9P45984 424 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 RPS25P62851 125 aaKnown RBP17.69■□□□□ 0.42
BBS4-204ENST00000562084 LEXMQ3ZCV2 418 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 HSD17B12Q53GQ0 312 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 HACD4Q5VWC8 232 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 PGBD2Q6P3X8 592 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 TMEM107Q6UX40 140 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 PRICKLE2Q7Z3G6 844 aa17.69■□□□□ 0.42
BBS4-204ENST00000562084 OR7G3Q8NG95 312 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms