RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	EPB41L1	Q9H4G0	881 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	RPF2	Q9H7B2	306 aa	Known RBP	7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	TPT1P8	Q9HAU6	139 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	SLAMF7	Q9NQ25	335 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	C1GALT1	Q9NS00	363 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	TAS2R9	Q9NYW1	312 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	TAS2R7	Q9NYW3	318 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	NLGN3	Q9NZ94	848 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	C6orf203	Q9P0P8	240 aa	Predicted RBP	7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	LRIT1	Q9P2V4	623 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	EPHA6	Q9UF33	1036 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	FBXW2	Q9UKT8	454 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	CORO2B	Q9UQ03	480 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	ATG4B	Q9Y4P1	393 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	NUP214	P35658	2090 aa	Predicted RBP	7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	ABCA12	Q86UK0	2595 aa		7.1	□□□□□ -1.27
TPM1-231	ENST00000561395	IGHV1OR21-1	A0A087WYE8	117 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395		A0A1W2PR48	441 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	SLC9B1P1	A6NJY1	282 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ENO4	A6NNW6	628 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CXCR6	O00574	342 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CASQ2	O14958	399 aa	Predicted RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	PGRMC2	O15173	223 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GSTA4	O15217	222 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	PROM1	O43490	865 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	HCRTR1	O43613	425 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GMNN	O75496	209 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	DXO	O77932	396 aa	Known RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	MT-CO3	P00414	261 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	EIF2S1	P05198	315 aa	Known RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GPI	P06744	558 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ABCB1	P08183	1280 aa	Predicted RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	NR2F6	P10588	404 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GLB1	P16278	677 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ALOX12	P18054	663 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GPX2	P18283	190 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	IL1RN	P18510	177 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ZNF10	P21506	573 aa	Predicted RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	UQCRC2	P22695	453 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	PSMA4	P25789	261 aa	Known RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	RBMS1	P29558	406 aa	Known RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	SOX11	P35716	441 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GPR3	P46089	330 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GFER	P55789	205 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	VSX2	P58304	361 aa	Predicted RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	BTN3A2	P78410	334 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	MAP7	Q14244	749 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	MLC1	Q15049	377 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CYP51A1	Q16850	503 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	C4orf17	Q53FE4	359 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CPZ	Q66K79	652 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GLYAT	Q6IB77	296 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	FAM92B	Q6ZTR7	304 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ZZZ3	Q8IYH5	903 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ADGRG5	Q8IZF4	528 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	LILRA2	Q8N149	483 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CARF	Q8N187	725 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CLEC4F	Q8N1N0	589 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ARHGEF39	Q8N4T4	335 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	DNAJC22	Q8N4W6	341 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	TRIML2	Q8N7C3	387 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	OR52E4	Q8NGH9	312 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	PSMA8	Q8TAA3	256 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	KLHL6	Q8WZ60	621 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	FIG4	Q92562	907 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	EXOSC8	Q96B26	276 aa	Known RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ZBED6CL	Q96FA7	236 aa	Predicted RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ZDHHC12	Q96GR4	267 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	TCTN2	Q96GX1	697 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	NSMCE2	Q96MF7	247 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	TGM7	Q96PF1	710 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	UCN2	Q96RP3	112 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	SERINC2	Q96SA4	455 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CD180	Q99467	661 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	MAP3K3	Q99759	626 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	MAPKAP1	Q9BPZ7	522 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ARHGAP9	Q9BRR9	750 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	SLC35A5	Q9BS91	424 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	NLN	Q9BYT8	704 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CHRNA10	Q9GZZ6	450 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CHST8	Q9H2A9	424 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CXorf36	Q9H7Y0	433 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	GORASP2	Q9H8Y8	452 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	NEUROD4	Q9HD90	331 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	FAM60A	Q9NP50	221 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ASCL3	Q9NQ33	180 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	SLC35C2	Q9NQQ7	365 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	THSD1	Q9NS62	852 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ACSS1	Q9NUB1	689 aa	Predicted RBP	7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	ARMC1	Q9NVT9	282 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	C5AR2	Q9P296	337 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	PHF11	Q9UIL8	331 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	RIMS3	Q9UJD0	308 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	CES1P1	Q9UKY3	287 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	PCDHGB4	Q9UN71	923 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	AP4S1	Q9Y587	144 aa		7.09	□□□□□ -1.27
TPM1-231	ENST00000561395	SCN3A	Q9NY46	2000 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	MN1	Q10571	1320 aa	Predicted RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	RNF103-CHMP3	A0A140T963	221 aa		7.08	□□□□□ -1.28

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