RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SIKE1Q9BRV8 207 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 FEM1AQ9BSK4 669 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 APOOQ9BUR5 198 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 NUAK2Q9H093 628 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 IQCGQ9H095 443 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 TRABDQ9H4I3 376 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 DHX35Q9H5Z1 703 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 CSNK1G1Q9HCP0 422 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 YAE1D1Q9NRH1 226 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 RASSF1Q9NS23 344 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ABCC13Q9NSE7 274 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 FAM49BQ9NUQ9 324 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 NSMCE4AQ9NXX6 385 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 CLIC5Q9NZA1 410 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 COQ3Q9NZJ6 369 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 NDUFAF4Q9P032 175 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 TXNDC16Q9P2K2 825 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 STOML2Q9UJZ1 356 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 PRDM4Q9UKN5 801 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 FZD10Q9ULW2 581 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SNX7Q9UNH6 387 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 C19orf53Q9UNZ5 99 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 ITM2BQ9Y287 266 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 AAR2Q9Y312 384 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 RRP15Q9Y3B9 282 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 OR1A2Q9Y585 309 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 HEY1Q9Y5J3 304 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 DGKBQ9Y6T7 804 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 FAM169AQ9Y6X4 670 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SONP18583 2426 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 NCOA6Q14686 2063 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 FAM237BA0A1B0GVD1 139 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TYW5A2RUC4 315 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 CFAP73A6NFT4 308 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TMEM202A6NGA9 273 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 SMIM23A6NLE4 172 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CCT8L1PA6NM43 557 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 C16orf96A6NNT2 1141 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 H0YHG0 523 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 K7ERQ8 282 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TULP2O00295 520 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 EEF2KO00418 725 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 PRYO14603 147 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 KLF11O14901 512 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 BIRC5O15392 142 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ACSL4O60488 711 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 KLHL41O60662 606 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 DCTN3O75935 186 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ANXA9O76027 345 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TM7SF2O76062 418 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TGDSO95455 350 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 APOEP02649 317 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 POLBP06746 335 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 APRTP07741 180 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CHRM5P08912 532 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 ZSCAN5DPP0CG00 497 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TROVE2P10155 538 aaKnown RBP eCLIP3.03□□□□□ -1.92
SPG11-225ENST00000561391 CYP2A6P11509 494 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 TCF4P15884 667 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 UGT1A4P22310 534 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CA4P22748 312 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CCNCP24863 283 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 AK4P27144 223 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 NDUFS1P28331 727 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 MPGP29372 298 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CCR1P32246 355 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 SKIV2L2P42285 1042 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 SLCO1A2P46721 670 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CXCR3P49682 368 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 SULT1E1P49888 294 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 DAOAP59103 153 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TAS2R50P59544 299 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 BASP1P80723 227 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 SULT2A1Q06520 285 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ADIGQ0VDE8 80 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 GTF3C1Q12789 2109 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 IFT88Q13099 833 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 IL11RAQ14626 422 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 KCNJ11Q14654 390 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 NR1D2Q14995 579 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 IRF4Q15306 451 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CDO1Q16878 200 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 C15orf59Q2T9L4 293 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 CHRFAM7AQ494W8 412 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 MIDNQ504T8 468 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 SPANXN3Q5MJ09 141 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ANKRD20A2Q5SQ80 823 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 UBAP2Q5T6F2 1119 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 ANKRD20A1Q5TYW2 823 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ANKRD20A3Q5VUR7 823 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 BSPRYQ5W0U4 402 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ATG16L1Q676U5 607 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TTC19Q6DKK2 380 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 TXNRD3NBQ6F5E7 133 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 NADSYN1Q6IA69 706 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 LCN10Q6JVE6 187 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 PWWP2BQ6NUJ5 590 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 LRRC8BQ6P9F7 803 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 SLC30A9Q6PML9 568 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 C6orf89Q6UWU4 347 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms