RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SSR4P51571 173 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 FOXL2P58012 376 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 DCAF7P61962 342 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 PSPHP78330 225 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 IRX1P78414 480 aaPredicted RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 MRPS22P82650 360 aaKnown RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 PRR5P85299 388 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 SRSF11Q05519 484 aaKnown RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 KLRB1Q12918 225 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 MFAP5Q13361 173 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 PCOLCEQ15113 449 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 TLR1Q15399 786 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 GSTA3Q16772 222 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 DPY19L1Q2PZI1 675 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 VPS26BQ4G0F5 336 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 CPZQ66K79 652 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 OPN5Q6U736 354 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 Q6ZSR9 355 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 SCUBE1Q8IWY4 988 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 VWA5B2Q8N398 1253 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 TRIML2Q8N7C3 387 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 OR1N1Q8NGS0 311 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 SLC2A12Q8TD20 617 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 BRIX1Q8TDN6 353 aaKnown RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 THAP3Q8WTV1 239 aaPredicted RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 SENP5Q96HI0 755 aaPredicted RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 RMND5AQ9H871 391 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 MEAF6Q9HAF1 191 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 HPF1Q9NWY4 346 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 TEX10Q9NXF1 929 aaPredicted RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 BAIAP2L1Q9UHR4 511 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 ERVK-19Q9WJR5 959 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 YARS2Q9Y2Z4 477 aaKnown RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 OR10H1Q9Y4A9 318 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 PCDHGB3Q9Y5G1 929 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 SNX8Q9Y5X2 465 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 USP34Q70CQ2 3546 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 A0A1W2PRB8 838 aa10□□□□□ -0.81
TPM1-229ENST00000561242 TTLL8A6PVC2 850 aa10□□□□□ -0.81
TPM1-229ENST00000561242 C4orf51C9J302 202 aa10□□□□□ -0.81
TPM1-229ENST00000561242 TP53I11O14683 189 aa10□□□□□ -0.81
TPM1-229ENST00000561242 ATXN7O15265 892 aaPredicted RBP10□□□□□ -0.81
TPM1-229ENST00000561242 PRAMEF2O60811 474 aa10□□□□□ -0.81
TPM1-229ENST00000561242 SNNO75324 88 aaPredicted RBP10□□□□□ -0.81
TPM1-229ENST00000561242 DNAJB5O75953 348 aa10□□□□□ -0.81
TPM1-229ENST00000561242 SOX30O94993 753 aa10□□□□□ -0.81
TPM1-229ENST00000561242 TBX6O95947 436 aaPredicted RBP10□□□□□ -0.81
TPM1-229ENST00000561242 KRT16P08779 473 aa10□□□□□ -0.81
TPM1-229ENST00000561242 CYB561P49447 251 aa10□□□□□ -0.81
TPM1-229ENST00000561242 PRKAG1P54619 331 aa10□□□□□ -0.81
TPM1-229ENST00000561242 PSMD4P55036 377 aaKnown RBP10□□□□□ -0.81
TPM1-229ENST00000561242 AQP5P55064 265 aa10□□□□□ -0.81
TPM1-229ENST00000561242 SOX8P57073 446 aa10□□□□□ -0.81
TPM1-229ENST00000561242 C19orf57Q0VDD7 668 aa10□□□□□ -0.81
TPM1-229ENST00000561242 NFATC3Q12968 1075 aa10□□□□□ -0.81
TPM1-229ENST00000561242 UGT3A2Q3SY77 523 aa10□□□□□ -0.81
TPM1-229ENST00000561242 ACER2Q5QJU3 275 aa10□□□□□ -0.81
TPM1-229ENST00000561242 GPALPP1Q8IXQ4 340 aa10□□□□□ -0.81
TPM1-229ENST00000561242 LGI4Q8N135 537 aa10□□□□□ -0.81
TPM1-229ENST00000561242 MIER2Q8N344 545 aa10□□□□□ -0.81
TPM1-229ENST00000561242 GLB1L3Q8NCI6 653 aaPredicted RBP10□□□□□ -0.81
TPM1-229ENST00000561242 OR8K3Q8NH51 312 aa10□□□□□ -0.81
TPM1-229ENST00000561242 CLHC1Q8NHS4 586 aa10□□□□□ -0.81
TPM1-229ENST00000561242 ACTRT2Q8TDY3 377 aa10□□□□□ -0.81
TPM1-229ENST00000561242 ANKRD9Q96BM1 317 aaPredicted RBP10□□□□□ -0.81
TPM1-229ENST00000561242 ERP27Q96DN0 273 aa10□□□□□ -0.81
TPM1-229ENST00000561242 CRELD1Q96HD1 420 aa10□□□□□ -0.81
TPM1-229ENST00000561242 IMMP1LQ96LU5 166 aa10□□□□□ -0.81
TPM1-229ENST00000561242 AICDAQ9GZX7 198 aa10□□□□□ -0.81
TPM1-229ENST00000561242 ZNF395Q9H8N7 513 aaPredicted RBP10□□□□□ -0.81
TPM1-229ENST00000561242 TIMMDC1Q9NPL8 285 aa10□□□□□ -0.81
TPM1-229ENST00000561242 TCF7L2Q9NQB0 619 aa10□□□□□ -0.81
TPM1-229ENST00000561242 ZNF446Q9NWS9 450 aa10□□□□□ -0.81
TPM1-229ENST00000561242 FAF1Q9UNN5 650 aaPredicted RBP10□□□□□ -0.81
TPM1-229ENST00000561242 PTGDR2Q9Y5Y4 395 aa10□□□□□ -0.81
TPM1-229ENST00000561242 IGKV3D-11A0A0A0MRZ8 115 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 TRAV17A0A0B4J275 112 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 A0A0G2JND7 137 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 TMEM247A6NEH6 219 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 TTC36A6NLP5 189 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 NPIPB8E9PQR5 432 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 PRKRAO75569 313 aaKnown RBP9.99□□□□□ -0.81
TPM1-229ENST00000561242 SLC22A3O75751 556 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 P04436 131 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 JUNP05412 331 aaKnown RBP9.99□□□□□ -0.81
TPM1-229ENST00000561242 ITGAMP11215 1152 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 G6PDP11413 515 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 SDC1P18827 310 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 EPHA3P29320 983 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 SOAT1P35610 550 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 MDH1P40925 334 aaKnown RBP9.99□□□□□ -0.81
TPM1-229ENST00000561242 KIR3DL1P43629 444 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 ARFIP2P53365 341 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 CLDN8P56748 225 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 KCNK10P57789 538 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 HSPB3Q12988 150 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 LY6DQ14210 128 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 ELOAQ14241 798 aaKnown RBP9.99□□□□□ -0.81
TPM1-229ENST00000561242 FAM71E1Q6IPT2 247 aa9.99□□□□□ -0.81
TPM1-229ENST00000561242 ANGPTL8Q6UXH0 198 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms