RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 LATO43561 262 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 FOXS1O43638 330 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 DUX1O43812 170 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 KIAA0513O60268 411 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 NOBOXO60393 691 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 STX11O75558 287 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CTAG2O75638 210 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SMC2O95347 1197 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZBTB11O95625 1053 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 CAVIN2O95810 425 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TSPAN12O95859 305 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ECDO95905 644 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 APOHP02749 345 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 PRKCGP05129 697 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ERCC1P07992 297 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 FGF2P09038 288 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 RSPH10BP0C881 870 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZCCHC18P0CG32 403 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PPIAL4FP0DN26 164 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 POU2F1P14859 743 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 H2AFXP16104 143 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 NAGAP17050 411 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CHRNB2P17787 502 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GPD1P21695 349 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LHCGRP22888 699 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 FCARP24071 287 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 UCP1P25874 307 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 C21orf33P30042 268 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 CYLC1P35663 651 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 RPL13AP40429 203 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 HTR2BP41595 481 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 HTR5AP47898 357 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 UQCRFS1P47985 274 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LEPRP48357 1165 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 CCT3P49368 545 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 RAB9AP51151 201 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CLCN4P51793 760 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 NDST1P52848 882 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PLA2G16P53816 162 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLURP1P55000 103 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PSMD4P55036 377 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 CDH6P55285 790 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CTSWP56202 376 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 MAZP56270 477 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 CLDN8P56748 225 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SELENOVP59797 346 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ABCE1P61221 599 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 RPS13P62277 151 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 RAB11AP62491 216 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 EEF1A1P68104 462 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 MYL7Q01449 175 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 OGDHQ02218 1023 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ENPEPQ07075 957 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 DLX2Q07687 328 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLC20A2Q08357 652 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZNF177Q13360 481 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 MSLNQ13421 630 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 MTX1Q13505 466 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GPR18Q14330 331 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GRB14Q14449 540 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 MAPRE2Q15555 327 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 RAB11BQ15907 218 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 RSPO4Q2I0M5 234 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 MIDNQ504T8 468 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SBK1Q52WX2 424 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 EARS2Q5JPH6 523 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLC35D3Q5M8T2 416 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PDZK1Q5T2W1 519 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 AGBL2Q5U5Z8 902 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LCN1P1Q5VSP4 162 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 EEF1A1P5Q5VTE0 462 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 IRAK1BP1Q5VVH5 260 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 MLIPQ5VWP3 458 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZNF776Q68DI1 518 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 OR2A2Q6IF42 318 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TCEAL6Q6IPX3 200 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LCN10Q6JVE6 187 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 FAM71F2Q6NXP2 309 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CCDC137Q6PK04 289 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZNF517Q6ZMY9 492 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 DPY19L2P2Q6ZN68 376 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GCNT7Q6ZNI0 430 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLC16A12Q6ZSM3 486 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CYP4V2Q6ZWL3 525 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 NLRP9Q7RTR0 991 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZNF367Q7RTV3 350 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CPEB2Q7Z5Q1 589 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 SNX20Q7Z614 316 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 MRGPREQ86SM8 312 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZNF554Q86TJ5 538 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TMPRSS12Q86WS5 348 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PTOV1Q86YD1 416 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TMEM139Q8IV31 216 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ARHGEF19Q8IW93 802 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CD302Q8IX05 232 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TDHQ8IZJ6 230 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLC38A6Q8IZM9 456 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 RNF113BQ8IZP6 322 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 GABRG1Q8N1C3 465 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CLIP4Q8N3C7 705 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms