RNA–Protein interactions for RNA: ENST00000561024.1

PDE8A-214, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-214ENST00000561024 RRP8O43159 456 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 ORC5O43913 435 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 EFCAB14O75071 495 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SLC22A5O76082 557 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 AP2A2O94973 939 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 CPSF4O95639 269 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 QDPRP09417 244 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SMIM10L2AP0DMW4 78 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SMIM10L2BP0DMW5 78 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SLC2A2P11168 524 aaPredicted RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 NAGAP17050 411 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 DGKAP23743 735 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 PTBP1P26599 531 aaKnown RBP eCLIP4.54□□□□□ -1.687e-7■■□□□ 13.5
PDE8A-214ENST00000561024 ACAA2P42765 397 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 BRCC3P46736 316 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SELENOWP63302 87 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SPIBQ01892 262 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SRSF11Q05519 484 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 MTAPQ13126 283 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 HNRNPA0Q13151 305 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 C1DQ13901 141 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 ADIPOQQ15848 244 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 EXOC3L2Q2M3D2 409 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 PTCHD3Q3KNS1 767 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 C6orf132Q5T0Z8 1188 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 MRM1Q6IN84 353 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SLC22A25Q6T423 547 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 KLHL17Q6TDP4 642 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 TLK2Q86UE8 772 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 CIR1Q86X95 450 aaPredicted RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 BBS7Q8IWZ6 715 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 DUSP18Q8NEJ0 188 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 ATP6V1C2Q8NEY4 427 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 AP3S1Q92572 193 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 AP2M1Q96CW1 435 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 TRMT61AQ96FX7 289 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 CMTM7Q96FZ5 175 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 TMEM80Q96HE8 168 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 CAMK1GQ96NX5 476 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 ATP6V0BQ99437 205 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 PIP5K1AQ99755 562 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 MAPKAP1Q9BPZ7 522 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 MGME1Q9BQP7 344 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 ZSCAN5AQ9BUG6 496 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 MND1Q9BWT6 205 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SPATA9Q9BWV2 254 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 C1QTNF7Q9BXJ2 289 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 PINK1Q9BXM7 581 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 CIPCQ9C0C6 399 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 P2RY12Q9H244 342 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 TPT1P8Q9HAU6 139 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SERINC1Q9NRX5 453 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 NDUFB11Q9NX14 153 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 ABI2Q9NYB9 513 aaPredicted RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 OR6C2Q9NZP2 312 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SH3BP4Q9P0V3 963 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 KLHL9Q9P2J3 617 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 NDRG2Q9UN36 371 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 SLC6A14Q9UN76 642 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 LSM2Q9Y333 95 aaKnown RBP4.54□□□□□ -1.68
PDE8A-214ENST00000561024 PCDHB11Q9Y5F2 797 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 PCDHB1Q9Y5F3 818 aa4.54□□□□□ -1.68
PDE8A-214ENST00000561024 TRAV19A0A0A6YYK7 116 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 hCG_1807616A0A1W2PRN6 198 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 DRGXA6NNA5 263 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 MEIS3P2A8K0S8 358 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 F5H0A9 414 aaPredicted RBP4.53□□□□□ -1.68
PDE8A-214ENST00000561024 SLC43A1O75387 559 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 CSO75390 466 aaKnown RBP4.53□□□□□ -1.68
PDE8A-214ENST00000561024 STK16O75716 305 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 SCO1O75880 301 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 APEHP13798 732 aaKnown RBP4.53□□□□□ -1.68
PDE8A-214ENST00000561024 ARSBP15848 533 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 PRKACAP17612 351 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 TNNI3P19429 210 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 RPS3P23396 243 aaKnown RBP eCLIP4.53□□□□□ -1.68
PDE8A-214ENST00000561024 SSTR4P31391 388 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 RECQLP46063 649 aaPredicted RBP4.53□□□□□ -1.68
PDE8A-214ENST00000561024 CRYBA2P53672 197 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 RPP30P78346 268 aaKnown RBP4.53□□□□□ -1.68
PDE8A-214ENST00000561024 CAMK2DQ13557 499 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 ARHGEF7Q14155 803 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 DOC2BQ14184 412 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 HKDC1Q2TB90 917 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 MEDAGQ5VYS4 303 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 FAM122CQ6P4D5 195 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 ZCCHC12Q6PEW1 402 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 HDDC2Q7Z4H3 204 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 KCTD20Q7Z5Y7 419 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 TSEN54Q7Z6J9 526 aaKnown RBP4.53□□□□□ -1.68
PDE8A-214ENST00000561024 DDX53Q86TM3 631 aaKnown RBP4.53□□□□□ -1.68
PDE8A-214ENST00000561024 CDH24Q86UP0 819 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 MON1AQ86VX9 555 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 SYT12Q8IV01 421 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 Q8N402 240 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 C9orf62Q8N4C0 152 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 C11orf65Q8NCR3 313 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 FAM46DQ8NEK8 389 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 OR4M2Q8NGB6 313 aa4.53□□□□□ -1.68
PDE8A-214ENST00000561024 OR6J1Q8NGC5 347 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms