RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 AIFM1O95831 613 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 KRT6AP02538 564 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 KRT6BP04259 564 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 HSD3B1P14060 373 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 HSD3B2P26439 372 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 CHRNB4P30926 498 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.33
TPM1-223ENST00000560445 GMPRP36959 345 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 RFC3P40938 356 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 KRT6CP48668 564 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 MAPK12P53778 367 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
TPM1-223ENST00000560445 NAA20P61599 178 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 KCNJ2P63252 427 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 HSF1Q00613 529 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 ASPHQ12797 758 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 ZNF267Q14586 743 aaPredicted RBP13.02□□□□□ -0.33
TPM1-223ENST00000560445 SF3B4Q15427 424 aaKnown RBP eCLIP13.02□□□□□ -0.331e-9■■□□□ 12.9
TPM1-223ENST00000560445 CCNYL2Q5T2Q4 361 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 SAMD14Q8IZD0 417 aaPredicted RBP13.02□□□□□ -0.33
TPM1-223ENST00000560445 C17orf47Q8NEP4 570 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 OR7G1Q8NGA0 311 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 OR4K14Q8NGD5 310 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 TRPC4APQ8TEL6 797 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 TP53INP1Q96A56 240 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 SDCCAG3Q96C92 435 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 SMC6Q96SB8 1091 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 SPOCK3Q9BQ16 436 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 SORBS1Q9BX66 1292 aaKnown RBP13.02□□□□□ -0.33
TPM1-223ENST00000560445 SHCBP1LQ9BZQ2 653 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 WWTR1Q9GZV5 400 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 LDAHQ9H6V9 325 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 EXO5Q9H790 373 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 ASB4Q9Y574 426 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 CACNA1CQ13936 2221 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 C2orf92A0A1B0GVN3 265 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 A0A1W2PR48 441 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 C1orf226A1L170 272 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 FAM166BA8MTA8 275 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 AQP7O14520 342 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 OR7A17O14581 309 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 WDR1O75083 606 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 EEDO75530 441 aaKnown RBP13.01□□□□□ -0.33
TPM1-223ENST00000560445 GLSO94925 669 aaPredicted RBP13.01□□□□□ -0.33
TPM1-223ENST00000560445 IGHG3P01860 377 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 RPS17P08708 135 aaKnown RBP13.01□□□□□ -0.33
TPM1-223ENST00000560445 KRT15P19012 456 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 MAN2A2P49641 1150 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 HERVK_113P63132 956 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 ERVK-8P63133 956 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 PSPHP78330 225 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 TRAF3Q13114 568 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 SLC10A1Q14973 349 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 RASA2Q15283 850 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 ZNF791Q3KP31 576 aaPredicted RBP13.01□□□□□ -0.33
TPM1-223ENST00000560445 C18orf63Q68DL7 685 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 LURAP1LQ8IV03 231 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 SLC22A9Q8IVM8 553 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 OR4N5Q8IXE1 308 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 C9orf40Q8IXQ3 194 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 FBXW8Q8N3Y1 598 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 FAM13CQ8NE31 585 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 OR52B6Q8NGF0 335 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 OR5M3Q8NGP4 307 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 ACMSDQ8TDX5 336 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 PAQR8Q8TEZ7 354 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 DCAKDQ8WVC6 231 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 CCDC126Q96EE4 140 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 SECISBP2Q96T21 854 aaKnown RBP13.01□□□□□ -0.33
TPM1-223ENST00000560445 C1QTNF3Q9BXJ4 246 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 ERVK-6Q9BXR3 956 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 DEFB127Q9H1M4 99 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 SEMA4BQ9NPR2 832 aaPredicted RBP13.01□□□□□ -0.33
TPM1-223ENST00000560445 FETUBQ9UGM5 382 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 TRPS1Q9UHF7 1281 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 ERVK-19Q9WJR5 959 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.01□□□□□ -0.33
TPM1-223ENST00000560445 PKDREJQ9NTG1 2253 aa13.01□□□□□ -0.33
TPM1-223ENST00000560445 NBPF19A0A087WUL8 3843 aa13□□□□□ -0.33
TPM1-223ENST00000560445 A0A1B0GVC2 190 aa13□□□□□ -0.33
TPM1-223ENST00000560445 ANKRD33BA6NCL7 494 aa13□□□□□ -0.33
TPM1-223ENST00000560445 H3BQF6 201 aa13□□□□□ -0.33
TPM1-223ENST00000560445 TMPRSS11DO60235 418 aa13□□□□□ -0.33
TPM1-223ENST00000560445 SNX4O95219 450 aa13□□□□□ -0.33
TPM1-223ENST00000560445 FBXO45P0C2W1 286 aa13□□□□□ -0.33
TPM1-223ENST00000560445 GABRA1P14867 456 aa13□□□□□ -0.33
TPM1-223ENST00000560445 CAPN3P20807 821 aa13□□□□□ -0.33
TPM1-223ENST00000560445 ACVR2AP27037 513 aa13□□□□□ -0.33
TPM1-223ENST00000560445 GCKP35557 465 aa13□□□□□ -0.33
TPM1-223ENST00000560445 GSTM5P46439 218 aa13□□□□□ -0.33
TPM1-223ENST00000560445 NEK2P51955 445 aa13□□□□□ -0.33
TPM1-223ENST00000560445 SLC37A1P57057 533 aa13□□□□□ -0.33
TPM1-223ENST00000560445 TRA2BP62995 288 aaKnown RBP13□□□□□ -0.33
TPM1-223ENST00000560445 EBPQ15125 230 aaKnown RBP13□□□□□ -0.33
TPM1-223ENST00000560445 ZNF750Q32MQ0 723 aa13□□□□□ -0.33
TPM1-223ENST00000560445 WLSQ5T9L3 541 aa13□□□□□ -0.33
TPM1-223ENST00000560445 TIFABQ6ZNK6 161 aa13□□□□□ -0.33
TPM1-223ENST00000560445 C16orf47Q6ZP98 133 aaPredicted RBP13□□□□□ -0.33
TPM1-223ENST00000560445 TRILQ7L0X0 811 aa13□□□□□ -0.33
TPM1-223ENST00000560445 CHERPQ8IWX8 916 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms