RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 DIO2Q92813 273 aa18.05■□□□□ 0.48
RABGGTA-214ENST00000560163 RBM18Q96H35 190 aaKnown RBP18.05■□□□□ 0.48
RABGGTA-214ENST00000560163 ANGPTL4Q9BY76 406 aa18.05■□□□□ 0.48
RABGGTA-214ENST00000560163 WWTR1Q9GZV5 400 aa18.05■□□□□ 0.48
RABGGTA-214ENST00000560163 C15orf41Q9Y2V0 281 aa18.05■□□□□ 0.48
RABGGTA-214ENST00000560163 NPFFR2Q9Y5X5 522 aa18.05■□□□□ 0.48
RABGGTA-214ENST00000560163 NBEAL1Q6ZS30 2694 aa18.05■□□□□ 0.48
RABGGTA-214ENST00000560163 RTCAO00442 366 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 CES2O00748 559 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 TAPBPO15533 448 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 ERN1O75460 977 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 SNX4O95219 450 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 CLPSP04118 112 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 HIST1H1TP22492 207 aaPredicted RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 CDC25BP30305 580 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 GGT5P36269 586 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 NAGLUP54802 743 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 DOC2AQ14183 400 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 EBPQ15125 230 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 RNASEH2BQ5TBB1 312 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 ADGRE4PQ86SQ3 457 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 LUZP2Q86TE4 346 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 ZNF441Q8N8Z8 693 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 SRFBP1Q8NEF9 429 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 PPP1R14CQ8TAE6 165 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 DOK4Q8TEW6 326 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 ANKRD49Q8WVL7 239 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 ANP32BQ92688 251 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 ABTB1Q969K4 478 aaPredicted RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 MAGOHBQ96A72 148 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 ART5Q96L15 291 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 RILPQ96NA2 401 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 SFXN3Q9BWM7 321 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 MS4A8Q9BY19 250 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 FETUBQ9UGM5 382 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 EIF3LQ9Y262 564 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 TESMINQ9Y4I5 508 aa18.04■□□□□ 0.48
RABGGTA-214ENST00000560163 CASKO14936 926 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 RCBTB2O95199 551 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 CPN2P22792 545 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 TSNQ15631 228 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 CYP1B1Q16678 543 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 SPRED3Q2MJR0 410 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 EIPR1Q53HC9 387 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 TMEM64Q6YI46 380 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 SLC29A4Q7RTT9 530 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 SPPL2AQ8TCT8 520 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 SLC44A1Q8WWI5 657 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 PTCD3Q96EY7 689 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 UCN2Q96RP3 112 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 GAL3ST4Q96RP7 486 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 TMEM79Q9BSE2 394 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 SPACA6W5XKT8 324 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 MED12Q93074 2177 aa18.03■□□□□ 0.48
RABGGTA-214ENST00000560163 IQANK1A0A1B0GTG1 560 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 A8MXE2 369 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 DEFB108AA8MXU0 73 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 CTIFO43310 598 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 DYRK3O43781 588 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 CRLF1O75462 422 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 CPN1P15169 458 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 RPL21P46778 160 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 FBXW4P57775 412 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 HERVK_113P63132 956 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ERVK-8P63133 956 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 PLIN5Q00G26 463 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 E2F2Q14209 437 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ZNF460Q14592 562 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 RPS6KA2Q15349 733 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 TGFBIQ15582 683 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ACKR1Q16570 336 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 WIPI1Q5MNZ9 446 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 TRMT10BQ6PF06 316 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 CCDC137Q6PK04 289 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ADAMTSL2Q86TH1 951 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ST13P4Q8IZP2 240 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ZNF473Q8WTR7 871 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 TANKQ92844 425 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ZFP3Q96NJ6 502 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 SECISBP2Q96T21 854 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 NAT9Q9BTE0 207 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ERVK-6Q9BXR3 956 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 RPF2Q9H7B2 306 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 DNAJC11Q9NVH1 559 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 C6orf203Q9P0P8 240 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 CTNNAL1Q9UBT7 734 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 NDRG3Q9UGV2 375 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 ERVK-19Q9WJR5 959 aa18.02■□□□□ 0.48
RABGGTA-214ENST00000560163 RAI1Q7Z5J4 1906 aaPredicted RBP18.02■□□□□ 0.47
RABGGTA-214ENST00000560163 OR6C76A6NM76 312 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 TP53I11O14683 189 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 CLGNO14967 610 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 ALOX15P16050 662 aaPredicted RBP18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 EPORP19235 508 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 CASP3P42574 277 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 CASP2P42575 452 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 RCAN2Q14206 197 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 TMEM35AQ53FP2 167 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 RNF111Q6ZNA4 994 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms