RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TRIM54Q9BYV2 358 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 REXO4Q9GZR2 422 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 PRDM7Q9NQW5 492 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 IARS2Q9NSE4 1012 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 KLHL28Q9NXS3 571 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 WIF1Q9Y5W5 379 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 KCNE2Q9Y6J6 123 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 PCNX3Q9H6A9 2034 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 MAGEB16A2A368 324 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 SDR42E2A6NKP2 422 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 SNPHO15079 494 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 TP73O15350 636 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 CLEC3AO75596 197 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 CYP4B1P13584 511 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 IVDP26440 423 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 GABRB3P28472 473 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 CPOXP36551 454 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 MSH2P43246 934 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 FNTAP49354 379 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 NAGLUP54802 743 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 NR1H2P55055 460 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 IL2P60568 153 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 GPS1Q13098 491 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 RCN2Q14257 317 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 SLBPQ14493 270 aaKnown RBP eCLIP11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 WIPI1Q5MNZ9 446 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 TBCELQ5QJ74 424 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 ADNP2Q6IQ32 1131 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 TRIM40Q6P9F5 258 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 SBSNQ6UWP8 590 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 TMIGD1Q6UXZ0 262 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 SLCO4C1Q6ZQN7 724 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 GSTA5Q7RTV2 222 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 ADGRE4PQ86SQ3 457 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 HIPK1Q86Z02 1210 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 MEIOBQ8N635 442 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 ZNF441Q8N8Z8 693 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 C2CD4AQ8NCU7 369 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 DOK4Q8TEW6 326 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 GAL3ST4Q96RP7 486 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 MAPKAP1Q9BPZ7 522 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 TUBA1CQ9BQE3 449 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 PIGMQ9H3S5 423 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 LYRM4Q9HD34 91 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 C15orf41Q9Y2V0 281 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 FREM1Q5H8C1 2179 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 MALRD1Q5VYJ5 2156 aa11.67□□□□□ -0.54
RABGGTA-213ENST00000560127 A0A087X1B8 175 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 PHF1O43189 567 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 FGF17O60258 216 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 ENO2P09104 434 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 C1GALT1C1LP0DN25 315 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 COX7A2P14406 83 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 MAGEA3P43357 314 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 RPL21P46778 160 aaKnown RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 STT3AP46977 705 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 IGLV3-21P80748 117 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 PPP1R3AQ16821 1122 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 C10orf62Q5T681 223 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 TMEM64Q6YI46 380 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 ZNF793Q6ZN11 406 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 OR4N5Q8IXE1 308 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 GCNT2Q8N0V5 402 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 PPWD1Q96BP3 646 aaKnown RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 RILPQ96NA2 401 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 TM9SF2Q99805 663 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 FAM167BQ9BTA0 163 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 WWTR1Q9GZV5 400 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 COPS7BQ9H9Q2 264 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 ZNF701Q9NV72 531 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 ZNF226Q9NYT6 803 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 SAR1BQ9Y6B6 198 aa11.66□□□□□ -0.54
RABGGTA-213ENST00000560127 PLCE1Q9P212 2302 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 RNF223E7ERA6 249 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 H2AFYO75367 372 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 TNFSF13O75888 250 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 SNX4O95219 450 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 MLNP12872 115 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 CPN1P15169 458 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 GNAZP19086 355 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 GSTM2P28161 218 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 DIO3P55073 304 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 FBXW4P57775 412 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 ETF1P62495 437 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 RPS6KA2Q15349 733 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 TOMM20Q15388 145 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 RNASEH2BQ5TBB1 312 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 SYT10Q6XYQ8 523 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 PLEKHM3Q6ZWE6 761 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 UBE3DQ7Z6J8 389 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 YRDCQ86U90 279 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 NAT8LQ8N9F0 302 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 FAM83FQ8NEG4 500 aaPredicted RBP11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 WNT2BQ93097 391 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 FBXL20Q96IG2 436 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 DGAT2Q96PD7 388 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 F2RL3Q96RI0 385 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms