RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RILPQ96NA2 401 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 IP6K3Q96PC2 410 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 CCNL2Q96S94 520 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 PELOQ9BRX2 385 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 CCDC106Q9BWC9 280 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 NMUR2Q9GZQ4 415 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 PRM3Q9NNZ6 103 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 ADAP2Q9NPF8 381 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 MIEF1Q9NQG6 463 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 NTMQ9P121 344 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 ARL2BPQ9Y2Y0 163 aa13.85□□□□□ -0.19
SNRPA1-207ENST00000559309 FAM234BA2RU67 622 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 ASPDHA6ND91 283 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 PSMG1O95456 288 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 CLPSP04118 112 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 IGKV3-11P04433 115 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 CSNK2A2P19784 350 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 PIK3R1P27986 724 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 PTPN6P29350 595 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 ACTN3Q08043 901 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 MAP4K2Q12851 820 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 SLC13A2Q13183 592 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 TLR1Q15399 786 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 PRICKLE4Q2TBC4 344 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 ZNF628Q5EBL2 1059 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 SPANXN4Q5MJ08 99 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 CPTPQ5TA50 214 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 FHL5Q5TD97 284 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 ANKRD26P1Q6NSI1 321 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 CPEB2Q7Z5Q1 589 aaKnown RBP13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 MRGPREQ86SM8 312 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 PRSS58Q8IYP2 241 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 LRRC25Q8N386 305 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 KLHL29Q96CT2 875 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 AMDHD1Q96NU7 426 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 DUSP26Q9BV47 211 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 SEMA4CQ9C0C4 833 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 FAM107BQ9H098 131 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 GLIPR2Q9H4G4 154 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 RABEP2Q9H5N1 569 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 CXorf21Q9HAI6 301 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 SERHLQ9NQF3 203 aa13.84□□□□□ -0.19
SNRPA1-207ENST00000559309 DYTNA2CJ06 578 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 SAGE2PA6NJ88 616 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 CAPN14A8MX76 684 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 PLOD2O00469 737 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 RNASET2O00584 256 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 FCHO1O14526 889 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 KLK10O43240 276 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 SLITRK5O94991 958 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 DDAH2O95865 285 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 IL6P05231 212 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 PGRP06401 933 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 COX7A2P14406 83 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 KIR3DL1P43629 444 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 ALDH9A1P49189 494 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 POLR2JP52435 117 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 SOX8P57073 446 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 ID2Q02363 134 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 FUT7Q11130 342 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 STX4Q12846 297 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 SF3A3Q12874 501 aaKnown RBP eCLIP13.83□□□□□ -0.29e-7■■■■■ 38.9
SNRPA1-207ENST00000559309 FAM174BQ3ZCQ3 159 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 EXOSC6Q5RKV6 272 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 FAM180BQ6P0A1 224 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 ARMC10Q8N2F6 343 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 APCDD1LQ8NCL9 501 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 CDC26Q8NHZ8 85 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 CIDECQ96AQ7 238 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 EXOSC8Q96B26 276 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 ERP27Q96DN0 273 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 CCDC115Q96NT0 180 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 SIRT3Q9NTG7 399 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 ATAD3AQ9NVI7 634 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 FAM120CQ9NX05 1096 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 MAT2BQ9NZL9 334 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 C19orf25Q9UFG5 118 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 BTNL2Q9UIR0 455 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 MAN2B2Q9Y2E5 1009 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 RAXQ9Y2V3 346 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 ZNF780BQ9Y6R6 833 aa13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 URB1O60287 2271 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-207ENST00000559309 PRSS51A0A1B0GVH4 220 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 PDPK1O15530 556 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 PLOD3O60568 738 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 CCDC22O60826 627 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 ERAL1O75616 437 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 CT62P0C5K7 136 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 DDX5P17844 614 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 CAPN3P20807 821 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 MPIP34949 423 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 FEN1P39748 380 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 NME5P56597 212 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 STX1BP61266 288 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 PLIN5Q00G26 463 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 KLF10Q13118 480 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 UBAP2LQ14157 1087 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 SOWAHCQ53LP3 525 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms