RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PRKAA2P54646 552 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 NAGLUP54802 743 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 FOXA1P55317 472 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 PLIN5Q00G26 463 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 ASPHQ12797 758 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 CUL3Q13618 768 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 ERCC6LQ2NKX8 1250 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 COMMD6Q7Z4G1 85 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 SLC22A9Q8IVM8 553 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 ZCCHC7Q8N3Z6 543 aaKnown RBP11.15□□□□□ -0.62
TPM1-216ENST00000558910 HORMAD2Q8N7B1 307 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 TMEM178AQ8NBL3 297 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 OR5M3Q8NGP4 307 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 ACMSDQ8TDX5 336 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 SSC4DQ8WTU2 575 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 NR4A3Q92570 626 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 SENP5Q96HI0 755 aaPredicted RBP11.15□□□□□ -0.62
TPM1-216ENST00000558910 EBPLQ9BY08 206 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 HPF1Q9NWY4 346 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 MS4A12Q9NXJ0 267 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 AHSPQ9NZD4 102 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 CPAMD8Q8IZJ3 1885 aa11.15□□□□□ -0.63
TPM1-216ENST00000558910 ZGRF1Q86YA3 2104 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 TMEM200CA6NKL6 621 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 G3V2L1 256 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 DYRK3O43781 588 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 SCELO95171 688 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 GPR75O95800 540 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 KRT6AP02538 564 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 PROCP04070 461 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 KRT6BP04259 564 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 GSTA1P08263 222 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 NT5EP21589 574 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 PIK3R1P27986 724 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 TNFRSF8P28908 595 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 DEKP35659 375 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 FEN1P39748 380 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 CCT5P48643 541 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 KRT6CP48668 564 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 GPR143P51810 404 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 HK2P52789 917 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 RNF4P78317 190 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 RASA2Q15283 850 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 SPDYAQ5MJ70 313 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 NDUFAF5Q5TEU4 345 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 MRM1Q6IN84 353 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 RPUSD3Q6P087 351 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 METTL2BQ6P1Q9 378 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 ZYG11AQ6WRX3 759 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 TMEM64Q6YI46 380 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 PAGE2Q7Z2X7 111 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 ZNF227Q86WZ6 799 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 SULF2Q8IWU5 870 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 SRRM1Q8IYB3 904 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 DEPDC4Q8N2C3 294 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 FAM98AQ8NCA5 519 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 MORN4Q8NDC4 146 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 ZNF721Q8TF20 911 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 TANKQ92844 425 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 RIT1Q92963 219 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 SCMH1Q96GD3 660 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 SLX1AQ9BQ83 275 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 BRINP2Q9C0B6 783 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 IQCGQ9H095 443 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 CENPHQ9H3R5 247 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 GSTO2Q9H4Y5 243 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 DDX31Q9H8H2 851 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 TRPS1Q9UHF7 1281 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 SLC5A6Q9Y289 635 aa11.14□□□□□ -0.63
TPM1-216ENST00000558910 SPTAN1Q13813 2472 aaKnown RBP11.14□□□□□ -0.63
TPM1-216ENST00000558910 A0A0G2JMM0 328 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 A0A1W2PPB8 328 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 GNG14A0A1W2PPG7 69 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 A0A1W2PRS3 328 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 FAM166BA8MTA8 275 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 KIR3DP1A8MWS1 328 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 UBFD1O14562 309 aaKnown RBP11.13□□□□□ -0.63
TPM1-216ENST00000558910 TFECO14948 347 aaPredicted RBP11.13□□□□□ -0.63
TPM1-216ENST00000558910 PEX1O43933 1283 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 NME2P1O60361 137 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 PLIN3O60664 434 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 ZNF354AO60765 605 aaPredicted RBP11.13□□□□□ -0.63
TPM1-216ENST00000558910 CDH16O75309 829 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 ULK1O75385 1050 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 CPA3P15088 417 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 ZNF24P17028 368 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 NME2P22392 152 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 SSTR4P31391 388 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 XKP51811 444 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 TDGF1P3P51864 188 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 PLGLB1Q02325 96 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 GALNT1Q10472 559 aaPredicted RBP11.13□□□□□ -0.63
TPM1-216ENST00000558910 LCP2Q13094 533 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 NNATQ16517 81 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 IMPG1Q17R60 797 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 GGTA1PQ4G0N0 100 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 CLEC6AQ6EIG7 209 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 OR52E8Q6IFG1 317 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 C3P1Q6ZMU1 363 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 C10orf107Q8IVU9 208 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms