RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CDC26Q8NHZ8 85 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 PPP1R14CQ8TAE6 165 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 KLHL1Q9NR64 748 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 ERVK-19Q9WJR5 959 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 ACTL7BQ9Y614 415 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 TMEM120BA0PK00 339 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 C1orf226A1L170 272 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 H3BQF6 201 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 PIP5K1BO14986 540 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 WISP2O76076 250 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 SLC35E2P0CK97 266 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 CPMP14384 443 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 NT5EP21589 574 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 TACR1P25103 407 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 SSTR4P31391 388 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 SOX18P35713 384 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 TRA2BP62995 288 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 RNF4P78317 190 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 KIAA0040Q15053 153 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 OR1C1Q15619 314 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 SPIN4Q56A73 249 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 FAM111BQ6SJ93 734 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 HSDL2Q6YN16 418 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 DDIASQ8IXT1 998 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 SIMC1Q8NDZ2 872 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 ADCY4Q8NFM4 1077 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 TWIST2Q8WVJ9 160 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 RIT1Q92963 219 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 EXOSC8Q96B26 276 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 TLCD1Q96CP7 247 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 EGLN2Q96KS0 407 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 C3orf30Q96M34 536 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 TAAR6Q96RI8 345 aa12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 UTP23Q9BRU9 249 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 EML4Q9HC35 981 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 COPG1Q9Y678 874 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-205ENST00000558745 SHANK1Q9Y566 2161 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 CROCCQ5TZA2 2017 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 TRAV17A0A0B4J275 112 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 SLC28A1O00337 649 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 TM9SF1O15321 606 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 GUCY1B2O75343 617 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 SKAP2O75563 359 aaPredicted RBP12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 ITGA10O75578 1167 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 OR2J2O76002 312 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 RSL1D1O76021 490 aaKnown RBP12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 NEURL1O76050 574 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 CLPSP04118 112 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 IGKV3-11P04433 115 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 JUNP05412 331 aaKnown RBP12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 COX7A2P14406 83 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 PORP16435 677 aaPredicted RBP12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 HK2P52789 917 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 PLIN5Q00G26 463 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 PMP22Q01453 160 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 C2orf80Q0P641 193 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 LTB4RQ15722 352 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 GALNTL6Q49A17 601 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 RFTN2Q52LD8 501 aaPredicted RBP12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF766Q5HY98 468 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 NOXRED1Q6NXP6 359 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 GALNT18Q6P9A2 607 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 C9orf40Q8IXQ3 194 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 CCDC116Q8IYX3 515 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 MDS2Q8NDY4 140 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 GRHL3Q8TE85 626 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 GFM2Q969S9 779 aaKnown RBP12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 KLHL29Q96CT2 875 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 CNRIP1Q96F85 164 aaPredicted RBP12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF681Q96N22 645 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 RNF32Q9H0A6 362 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 ANKRA2Q9H9E1 313 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 CXorf21Q9HAI6 301 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 LRTM1Q9HBL6 345 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 SIRT5Q9NXA8 310 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 LRFN1Q9P244 771 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 ABI3Q9P2A4 366 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 BAIAP2L1Q9UHR4 511 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 UTS2RQ9UKP6 389 aa12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 EXO1Q9UQ84 846 aaKnown RBP12.84□□□□□ -0.35
TSPAN3-205ENST00000558745 ATP6AP2A0A1C7CYW4 349 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 TCP11X1B4DZS4 312 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 BIRC5O15392 142 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 RGS14O43566 566 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 PRAMEF2O60811 474 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 NME6O75414 186 aaPredicted RBP12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 ATP6AP2O75787 350 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 OR6B1O95007 311 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 ZWINTO95229 277 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 HSPA4LO95757 839 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 SERPINE1P05121 402 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 NEFHP12036 1026 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 H2AFXP16104 143 aaPredicted RBP12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 GNLYP22749 145 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 ABCE1P61221 599 aaKnown RBP12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 MGAT2Q10469 447 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 BIKQ13323 160 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 NR6A1Q15406 480 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms