RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 VAC14Q08AM6 782 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 NKG7Q16617 165 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 C3orf38Q5JPI3 329 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 NANOGP8Q6NSW7 305 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 C6orf15Q6UXA7 325 aaPredicted RBP13.96□□□□□ -0.17
VPS18-202ENST00000558474 BNC2Q6ZN30 1099 aaPredicted RBP13.96□□□□□ -0.17
VPS18-202ENST00000558474 CCDC116Q8IYX3 515 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 STT3BQ8TCJ2 826 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 MCUR1Q96AQ8 359 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 RBM18Q96H35 190 aaKnown RBP13.96□□□□□ -0.17
VPS18-202ENST00000558474 RAB3IPQ96QF0 476 aaPredicted RBP13.96□□□□□ -0.17
VPS18-202ENST00000558474 NANOGQ9H9S0 305 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 C3orf14Q9HBI5 128 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 DLL3Q9NYJ7 618 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 SLC25A37Q9NYZ2 338 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 SLAMF8Q9P0V8 285 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 PTGFRNQ9P2B2 879 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 GPN3Q9UHW5 284 aaPredicted RBP13.96□□□□□ -0.17
VPS18-202ENST00000558474 PADI1Q9ULC6 663 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 A0A1W2PNU3 283 aaPredicted RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 WASHC1A8K0Z3 465 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 AGRPO00253 132 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 CLIC1O00299 241 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 ABCB1P08183 1280 aaPredicted RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 EEFSECP57772 596 aaKnown RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 PRR5P85299 388 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 MAP4K2Q12851 820 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 FADDQ13158 208 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 SAMD4BQ5PRF9 694 aaKnown RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 ZNF551Q7Z340 670 aaPredicted RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 MSRB3Q8IXL7 192 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 ESX1Q8N693 406 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 ZFP90Q8TF47 636 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 MR1Q95460 341 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 PMEPA1Q969W9 287 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 TMEM125Q96AQ2 219 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 PTCHD1Q96NR3 888 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 SLC46A1Q96NT5 459 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 DGAT2Q96PD7 388 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 CPPED1Q9BRF8 314 aaPredicted RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 SPATA9Q9BWV2 254 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 CADM1Q9BY67 442 aaKnown RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 ALOXE3Q9BYJ1 711 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 NRSN2Q9GZP1 204 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 CXorf36Q9H7Y0 433 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 TPT1P8Q9HAU6 139 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 IL1RL2Q9HB29 575 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 SIRT3Q9NTG7 399 aaPredicted RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.95□□□□□ -0.18
VPS18-202ENST00000558474 RAPGEFL1Q9UHV5 662 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 ACSL6Q9UKU0 697 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 ERVK-11Q9UQG0 969 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 L3MBTL1Q9Y468 752 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 NEUROG3Q9Y4Z2 214 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 CLDN16Q9Y5I7 305 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 FAM186AA6NE01 2351 aa13.95□□□□□ -0.18
VPS18-202ENST00000558474 TCRBV16S1A1N1A0A5B0 115 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 EMC8O43402 210 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 DYRK3O43781 588 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 OR10H2O60403 315 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 PLOD3O60568 738 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 BCAS2O75934 225 aaPredicted RBP13.94□□□□□ -0.18
VPS18-202ENST00000558474 DXOO77932 396 aaKnown RBP13.94□□□□□ -0.18
VPS18-202ENST00000558474 SOX30O94993 753 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 TNFSF15O95150 251 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 C8orf89P0DMQ9 161 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 GPX2P18283 190 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 PGM1P36871 562 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 CCT3P49368 545 aaKnown RBP13.94□□□□□ -0.18
VPS18-202ENST00000558474 BTG2P78543 158 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 HSPB3Q12988 150 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 ERV3-1Q14264 604 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 PRICKLE4Q2TBC4 344 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 MINDY4Q4G0A6 757 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 ZNF628Q5EBL2 1059 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 VWA2Q5GFL6 755 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 C6orf163Q5TEZ5 329 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 OR4N5Q8IXE1 308 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 SLC15A3Q8IY34 581 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 GALNT6Q8NCL4 622 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 OR56A1Q8NGH5 318 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 CTHRC1Q96CG8 243 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 ELP4Q96EB1 424 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 NEURL3Q96EH8 262 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 CDRT15Q96T59 188 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 SLC35A5Q9BS91 424 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 RBCK1Q9BYM8 510 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 TRIM4Q9C037 500 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 VN1R1Q9GZP7 353 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 CTSFQ9UBX1 484 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 PADI2Q9Y2J8 665 aa13.94□□□□□ -0.18
VPS18-202ENST00000558474 CDRT15L2A8MXV6 281 aa13.93□□□□□ -0.18
VPS18-202ENST00000558474 CDC123O75794 336 aaPredicted RBP13.93□□□□□ -0.18
VPS18-202ENST00000558474 RECKO95980 971 aa13.93□□□□□ -0.18
VPS18-202ENST00000558474 IGHEP01854 428 aa13.93□□□□□ -0.18
VPS18-202ENST00000558474 GSNP06396 782 aa13.93□□□□□ -0.18
VPS18-202ENST00000558474 HEXBP07686 556 aa13.93□□□□□ -0.18
VPS18-202ENST00000558474 HSD17B1P14061 328 aa13.93□□□□□ -0.18
VPS18-202ENST00000558474 RBMS1P29558 406 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms