RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 CPOXP36551 454 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 ZNF75DP51815 510 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 RPS6KA2Q15349 733 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 HIST2H2ACQ16777 129 aaPredicted RBP16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 AP5B1Q2VPB7 878 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 SPANXN3Q5MJ09 141 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 HIST2H2AA3Q6FI13 130 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 SCIMPQ6UWF3 145 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 C20orf204Q6ZNR8 217 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 GALNT7Q86SF2 657 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 CNTN4Q8IWV2 1026 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 NKAPQ8N5F7 415 aaKnown RBP16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 ACOT4Q8N9L9 421 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 ANKRD7Q92527 254 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 GNRHR2Q96P88 292 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 WWTR1Q9GZV5 400 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 EHD1Q9H4M9 534 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 IKZF3Q9UKT9 509 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 C15orf41Q9Y2V0 281 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 TESMINQ9Y4I5 508 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 H0Y3Z8 333 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 FGF17O60258 216 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 OR10H2O60403 315 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 TBX6O95947 436 aaPredicted RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 ACTL6AO96019 429 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 ZNF37AP17032 561 aaPredicted RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 ATP5A1P25705 553 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 TLX1P31314 330 aaPredicted RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 TMED10P49755 219 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 HERVK_113P63132 956 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 ERVK-8P63133 956 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 EEF1A1P68104 462 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 FOXF2Q12947 444 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 EIPR1Q53HC9 387 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 PAGE2BQ5JRK9 111 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 WIPI1Q5MNZ9 446 aaPredicted RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 EEF1A1P5Q5VTE0 462 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 HLA-DQA1Q5Y7H0 255 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 VN1R5Q7Z5H4 357 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 ADAMTSL2Q86TH1 951 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 ZNF441Q8N8Z8 693 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 INTS12Q96CB8 462 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 PTCD3Q96EY7 689 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 PIK3IP1Q96FE7 263 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 PELOQ9BRX2 385 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 ERVK-6Q9BXR3 956 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 PHACTR1Q9C0D0 580 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 UBQLN3Q9H347 655 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 RPF2Q9H7B2 306 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 CNOT10Q9H9A5 744 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 CTNNAL1Q9UBT7 734 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 ERVK-19Q9WJR5 959 aa16.27■□□□□ 0.2
TSPAN3-204ENST00000558394 NCF1BA6NI72 391 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 OR6C76A6NM76 312 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 NCF1CA8MVU1 366 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 HRKO00198 91 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 CTIFO43310 598 aaKnown RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 RCBTB2O95199 551 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 C8BP07358 591 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 NCF1P14598 390 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 ALOX15P16050 662 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 SSR2P43308 183 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 SLC6A12P48065 614 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 FBXW4P57775 412 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 IGLV3-21P80748 117 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 GAB1Q13480 694 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 LAPTM5Q13571 262 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 ZNF267Q14586 743 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 C18orf21Q32NC0 220 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 DCST1Q5T197 706 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 ENPP6Q6UWR7 440 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 ZNF793Q6ZN11 406 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 TMEM139Q8IV31 216 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 SNX31Q8N9S9 440 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 BBOF1Q8ND07 529 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 SLC44A1Q8WWI5 657 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 UCN3Q969E3 161 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 MAGOHBQ96A72 148 aaKnown RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 RHBDF1Q96CC6 855 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 CERS2Q96G23 380 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 NAT9Q9BTE0 207 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 MED18Q9BUE0 208 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 EFCAB11Q9BUY7 163 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 RBSNQ9H1K0 784 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 SNX15Q9NRS6 342 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 TEX10Q9NXF1 929 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 MS4A12Q9NXJ0 267 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 WWOXQ9NZC7 414 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 PACSIN3Q9UKS6 424 aa16.26■□□□□ 0.19
TSPAN3-204ENST00000558394 C2orf92A0A1B0GVN3 265 aa16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 RTCAO00442 366 aaKnown RBP16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 CDH16O75309 829 aa16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 IFNA2P01563 188 aa16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 HIST1H1TP22492 207 aaPredicted RBP16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 NRG3P56975 720 aa16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 SRYQ05066 204 aa16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 EBPQ15125 230 aaKnown RBP16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 TMEM35AQ53FP2 167 aa16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 TEDDM1Q5T9Z0 273 aa16.25■□□□□ 0.19
TSPAN3-204ENST00000558394 BICRALQ6AI39 1079 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms