RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZFYVE21Q9BQ24 234 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 EFHD1Q9BUP0 239 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 COQ10BQ9H8M1 238 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 NTN4Q9HB63 628 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 IL21RQ9HBE5 538 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 SLC35C2Q9NQQ7 365 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 C1GALT1Q9NS00 363 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 OLAHQ9NV23 265 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 EHD3Q9NZN3 535 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 KCMF1Q9P0J7 381 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 FBXW2Q9UKT8 454 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 RNF215Q9Y6U7 377 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 VCANP13611 3396 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 KNL1Q8NG31 2342 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 USP34Q70CQ2 3546 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 RNF103-CHMP3A0A140T963 221 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 SLC9B1P1A6NJY1 282 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 SAC3D1A6NKF1 404 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 MYO1GB0I1T2 1018 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 DLGAP1O14490 977 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 SOCS2O14508 198 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 EIF1AYO14602 144 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 KIF1CO43896 1103 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 GMNNO75496 209 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 F13BP05160 661 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 EIF2S1P05198 315 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 RPSAP08865 295 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 RAP2AP10114 183 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 FCGR1AP12314 374 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 MYF5P13349 255 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 UQCRC2P22695 453 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 PPIBP23284 216 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 FASP25445 335 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 KDELR2P33947 212 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 PTGER1P34995 402 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 PCGF2P35227 344 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 SOAT1P35610 550 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 TSFMP43897 325 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 CAPZBP47756 277 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 GABRA4P48169 554 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 RXRGP48443 463 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 CCT8P50990 548 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 MANFP55145 182 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 GFERP55789 205 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 CFHR1Q03591 330 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 TGM3Q08188 693 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 HSPB3Q12988 150 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 MLC1Q15049 377 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 DEFB110Q30KQ9 67 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 DEFB134Q4QY38 66 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 RPS26P11Q5JNZ5 115 aaPredicted RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 GCNT6Q5T4J0 391 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 NKAIN2Q5VXU1 208 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 LYSMD4Q5XG99 296 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 PMS2CLQ68D20 193 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 ARMC6Q6NXE6 501 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 ERICH5Q6P6B1 374 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 PRSS41Q7RTY9 318 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 KANSL1Q7Z3B3 1105 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 MCATQ8IVS2 390 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 SDR16C5Q8N3Y7 309 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 GALNT4Q8N4A0 578 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 DNAJC22Q8N4W6 341 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 NATD1Q8N6N6 113 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 CSNK1A1LQ8N752 337 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 C19orf47Q8N9M1 422 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 AVL9Q8NBF6 648 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 CAMKVQ8NCB2 501 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 ICA1LQ8NDH6 482 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 SUN3Q8TAQ9 357 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 EDAQ92838 391 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 NCLNQ969V3 563 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 PPWD1Q96BP3 646 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 NEURL3Q96EH8 262 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 CNRIP1Q96F85 164 aaPredicted RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 CENPNQ96H22 339 aaPredicted RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 PYURFQ96I23 114 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 RNF145Q96MT1 663 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 ZNF681Q96N22 645 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 MAP3K3Q99759 626 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 FAIM2Q9BWQ8 316 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 SPATA9Q9BWV2 254 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 RBCK1Q9BYM8 510 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 VCX3BQ9H321 246 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 SERHL2Q9H4I8 314 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 ERVMER34-1Q9H9K5 563 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 FSCN3Q9NQT6 498 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 STARD5Q9NSY2 213 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 ACSS1Q9NUB1 689 aaPredicted RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 LYARQ9NX58 379 aaKnown RBP6.95□□□□□ -1.3
SPG11-204ENST00000557866 RAPGEFL1Q9UHV5 662 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 PILRBQ9UKJ0 227 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 PCDHGB4Q9UN71 923 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 ABCA7Q8IZY2 2146 aa6.95□□□□□ -1.3
SPG11-204ENST00000557866 A0A1B0GTW7 788 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 ZNF860A6NHJ4 632 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 PDLIM1O00151 329 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CASC3O15234 703 aaKnown RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 CLOCKO15516 846 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms