RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CEP104O60308 925 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 EIF4EBP3O60516 100 aaPredicted RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 OR2J2O76002 312 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 MYO1DO94832 1006 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 OR6B1O95007 311 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 IPO7O95373 1038 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 TGFB1P01137 390 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 IGLV1-40P01703 118 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 RAF1P04049 648 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 SERPIND1P05546 499 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 HEXAP06865 529 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 MPC1LP0DKB6 136 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 ENO3P13929 434 aaPredicted RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 PPP2R1BP30154 601 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 RPL22P35268 128 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 GRK3P35626 688 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 CYLC1P35663 651 aaPredicted RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 SOX3P41225 446 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 MAGEA5P43359 124 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 NPY2RP49146 381 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 CCR8P51685 355 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 SKP1P63208 163 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 NAE1Q13564 534 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 SNX1Q13596 522 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 KEAP1Q14145 624 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 KCTD19Q17RG1 926 aaPredicted RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 TTLL9Q3SXZ7 439 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 FLYWCH1Q4VC44 716 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 XKR6Q5GH73 641 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF470Q6ECI4 717 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 KIAA0930Q6ICG6 404 aaPredicted RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 NEPROQ6NW34 567 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF549Q6P9A3 640 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 RGS9BPQ6ZS82 235 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 ABHD13Q7L211 337 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 CTAGE6Q86UF2 777 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 KRTAP1-3Q8IUG1 177 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 CPNE9Q8IYJ1 553 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 PRR18Q8N4B5 295 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 TMEM251Q8N6I4 163 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 ARL6IP6Q8N6S5 226 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 RELL2Q8NC24 303 aaPredicted RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 B3GNT7Q8NFL0 401 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 CD200R1Q8TD46 325 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 UTP15Q8TED0 518 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 FAM222BQ8WU58 562 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 KCNJ9Q92806 393 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 NCLNQ969V3 563 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 PDLIM2Q96JY6 352 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 GPR21Q99679 349 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 SH3GL2Q99962 352 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 SGPP1Q9BX95 441 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 PCBD2Q9H0N5 130 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 SPNS1Q9H2V7 528 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 RHBGQ9H310 441 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 C7orf69Q9H7B7 122 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 LIN28AQ9H9Z2 209 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 PNO1Q9NRX1 252 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 HPF1Q9NWY4 346 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 TRMT1Q9NXH9 659 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 ALKBH4Q9NXW9 302 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 ADAMTS6Q9UKP5 1117 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 PPIEQ9UNP9 301 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF148Q9UQR1 794 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 PDE10AQ9Y233 779 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 DRG1Q9Y295 367 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 YARS2Q9Y2Z4 477 aaKnown RBP5.41□□□□□ -1.54
VPS33B-207ENST00000557470 NBEAL1Q6ZS30 2694 aa5.41□□□□□ -1.54
VPS33B-207ENST00000557470 A0A087X0M5 115 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 A0A1B0GX30 115 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 ATP6AP2A0A1C7CYW4 349 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 TRBC2A0A5B9 178 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 CTAGE9A4FU28 777 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 PSMD12O00232 456 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 WWP2O00308 870 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 SYT5O00445 386 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 GSTA4O15217 222 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 AHCYL1O43865 530 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 WDR1O75083 606 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 ATP6AP2O75787 350 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 RNH1P13489 461 aaKnown RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 NPPBP16860 134 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 ENDOUP21128 410 aaKnown RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 TACR1P25103 407 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 PEX19P40855 299 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 HNF4AP41235 474 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 MAN2A2P49641 1150 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 GPR143P51810 404 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 RAB8AP61006 207 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 DCAF7P61962 342 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 BASP1P80723 227 aaKnown RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 RGS1Q08116 209 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 FOXO1Q12778 655 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 CTBP1Q13363 440 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 PHKG1Q16816 387 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF750Q32MQ0 723 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 C1orf185Q5T7R7 199 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 RIPPLY2Q5TAB7 128 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms