RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZNF295-AS1Q8N0V1 137 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 PLD6Q8N2A8 252 aaKnown RBP13.08□□□□□ -0.32
SNX6-210ENST00000557341 RPRMLQ8N4K4 120 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 OR52B6Q8NGF0 335 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 SLC44A1Q8WWI5 657 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 ATP6V1E2Q96A05 226 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 ISL2Q96A47 359 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 C14orf79Q96F83 325 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 FMO2Q99518 471 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 SERPINI1Q99574 410 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 FUT8Q9BYC5 575 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 WWTR1Q9GZV5 400 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 TSPYL1Q9H0U9 437 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 NOL11Q9H8H0 719 aaKnown RBP13.08□□□□□ -0.32
SNX6-210ENST00000557341 PNPLA3Q9NST1 481 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 TUBA8Q9NY65 449 aaPredicted RBP13.08□□□□□ -0.32
SNX6-210ENST00000557341 PSD3Q9NYI0 1048 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 XPR1Q9UBH6 696 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 RNF6Q9Y252 685 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 RNF11Q9Y3C5 154 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 ASB4Q9Y574 426 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 CCDC168Q8NDH2 2452 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 A0A1W2PR48 441 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 GLOD5A6NK44 160 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 OR6C76A6NM76 312 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 FAM90A27PA6NNH2 459 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 STX16-NPEPL1H3BU86 382 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 AQP7O14520 342 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 OR7A17O14581 309 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 STX16O14662 325 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 NADKO95544 446 aaPredicted RBP13.07□□□□□ -0.32
SNX6-210ENST00000557341 RBP1P09455 135 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 ACVR2AP27037 513 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 GALNSP34059 522 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 MAGEA12P43365 314 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 MAN2A2P49641 1150 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 SERPINB9P50453 376 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 SLC37A1P57057 533 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 KCNJ2P63252 427 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 ZNF267Q14586 743 aaPredicted RBP13.07□□□□□ -0.32
SNX6-210ENST00000557341 EBPQ15125 230 aaKnown RBP13.07□□□□□ -0.32
SNX6-210ENST00000557341 TSNAXIP1Q2TAA8 658 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 C10orf62Q5T681 223 aaPredicted RBP13.07□□□□□ -0.32
SNX6-210ENST00000557341 SLC22A10Q63ZE4 541 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 ACAD11Q709F0 780 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 ACBD4Q8NC06 268 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 PAQR8Q8TEZ7 354 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 RIT1Q92963 219 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 PHF21BQ96EK2 531 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 CDK15Q96Q40 435 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 PAFAH2Q99487 392 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 LDAHQ9H6V9 325 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 ZNF703Q9H7S9 590 aaPredicted RBP13.07□□□□□ -0.32
SNX6-210ENST00000557341 SH2D2AQ9NP31 389 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 PCTPQ9UKL6 214 aa13.07□□□□□ -0.32
SNX6-210ENST00000557341 BOKQ9UMX3 212 aaPredicted RBP13.07□□□□□ -0.32
SNX6-210ENST00000557341 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.07□□□□□ -0.32
SNX6-210ENST00000557341 A0A1B0GVC2 190 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 ATP6AP2A0A1C7CYW4 349 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 SUSD5O60279 629 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 SMIM24O75264 130 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 ATP6AP2O75787 350 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 KRT38O76015 456 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 GBAP04062 536 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 FBXO45P0C2W1 286 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 SLC35E2P0CK97 266 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 CNTFP26441 200 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 PIK3R1P27986 724 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 SERPINB3P29508 390 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 PIGAP37287 484 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 NEK2P51955 445 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 NUP107P57740 925 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 IFT88Q13099 833 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 TRAF3Q13114 568 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 GXYLT1Q4G148 440 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 PRAMEF20Q5VT98 475 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 FRG2Q64ET8 278 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 TTC19Q6DKK2 380 aaPredicted RBP13.06□□□□□ -0.32
SNX6-210ENST00000557341 ZNF585AQ6P3V2 769 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 ADGRD1Q6QNK2 874 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 LYPD8Q6UX82 237 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 FBXW8Q8N3Y1 598 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 FAM13CQ8NE31 585 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 OR5M9Q8NGP3 310 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 LILRB4Q8NHJ6 448 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 SARAFQ96BY9 339 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 FRG2BQ96QU4 278 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 TREX2Q9BQ50 279 aaPredicted RBP13.06□□□□□ -0.32
SNX6-210ENST00000557341 NTMT1Q9BV86 223 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 EXO5Q9H790 373 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 ZNF358Q9NW07 568 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 TEX10Q9NXF1 929 aaPredicted RBP13.06□□□□□ -0.32
SNX6-210ENST00000557341 CNIH4Q9P003 139 aa13.06□□□□□ -0.32
SNX6-210ENST00000557341 TRGV5A0A0B4J1U4 118 aa13.05□□□□□ -0.32
SNX6-210ENST00000557341 NKX2-6A6NCS4 301 aa13.05□□□□□ -0.32
SNX6-210ENST00000557341 FOXO6A8MYZ6 492 aa13.05□□□□□ -0.32
SNX6-210ENST00000557341 HCN1O60741 890 aa13.05□□□□□ -0.32
SNX6-210ENST00000557341 WDR1O75083 606 aa13.05□□□□□ -0.32
SNX6-210ENST00000557341 CELA3AP09093 270 aa13.05□□□□□ -0.32
SNX6-210ENST00000557341 COL6A2P12110 1019 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms