RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CNPPD1Q9BV87 410 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 ERVK-6Q9BXR3 956 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 ZNF717Q9BY31 904 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-213ENST00000557262 EXO5Q9H790 373 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 WDR41Q9HAD4 459 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 CNIH4Q9P003 139 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 ERVK-19Q9WJR5 959 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 RNF11Q9Y3C5 154 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 A0A096LPK6 155 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 A0A0A6YYD5 115 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 TRGV5A0A0B4J1U4 118 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 A0A1W2PR48 441 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 OR6C76A6NM76 312 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 FOXE1O00358 373 aaPredicted RBP14.64□□□□□ -0.07
TUBB3-213ENST00000557262 OR10H2O60403 315 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 WDR1O75083 606 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 EEDO75530 441 aaKnown RBP14.64□□□□□ -0.07
TUBB3-213ENST00000557262 PRKRAO75569 313 aaKnown RBP14.64□□□□□ -0.07
TUBB3-213ENST00000557262 FAM58BPP0C7Q3 252 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 GLI4P10075 376 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 TYK2P29597 1187 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 PIK3CGP48736 1102 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 NEK2P51955 445 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 SLC37A1P57057 533 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 KCNJ2P63252 427 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 RTL6Q6ICC9 239 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 ADGRD1Q6QNK2 874 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 SYT10Q6XYQ8 523 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 RNF111Q6ZNA4 994 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 ZNF572Q7Z3I7 529 aaPredicted RBP14.64□□□□□ -0.07
TUBB3-213ENST00000557262 GOLGA7Q7Z5G4 137 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 CDH24Q86UP0 819 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 FBXW8Q8N3Y1 598 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 WDR20Q8TBZ3 569 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 GPR78Q96P69 363 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 ZFP64Q9NPA5 681 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 ALKBH4Q9NXW9 302 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 TNFRSF10DQ9UBN6 386 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 BOKQ9UMX3 212 aaPredicted RBP14.64□□□□□ -0.07
TUBB3-213ENST00000557262 FAM215AQ9Y5M1 114 aa14.64□□□□□ -0.07
TUBB3-213ENST00000557262 PHF3Q92576 2039 aaKnown RBP14.64□□□□□ -0.07
TUBB3-213ENST00000557262 HCFC1P51610 2035 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 GLOD5A6NK44 160 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 TMPRSS11DO60235 418 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 CLDN9O95484 217 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 FBXO45P0C2W1 286 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 RFPL3SP0C7P2 107 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 SLC35E2P0CK97 266 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 NR2F6P10588 404 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 GABRA1P14867 456 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 SLC7A5Q01650 507 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 UAP1Q16222 522 aaPredicted RBP14.63□□□□□ -0.07
TUBB3-213ENST00000557262 PRAMEF20Q5VT98 475 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 CLYBLQ8N0X4 340 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 FAM13CQ8NE31 585 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 UCN3Q969E3 161 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 ATP6V1E2Q96A05 226 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 GAL3ST4Q96RP7 486 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 WWTR1Q9GZV5 400 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 PROK2Q9HC23 129 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 SLC24A3Q9HC58 644 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 ACKR4Q9NPB9 350 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 QPCTLQ9NXS2 382 aa14.63□□□□□ -0.07
TUBB3-213ENST00000557262 CPSF2Q9P2I0 782 aaKnown RBP14.63□□□□□ -0.07
TUBB3-213ENST00000557262 CHCHD2Q9Y6H1 151 aaPredicted RBP14.63□□□□□ -0.07
TUBB3-213ENST00000557262 A0A0G2JNJ9 132 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 ESYT3A0FGR9 886 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 SIX3O95343 332 aaPredicted RBP14.62□□□□□ -0.07
TUBB3-213ENST00000557262 ALDOAP04075 364 aaKnown RBP14.62□□□□□ -0.07
TUBB3-213ENST00000557262 PHBP35232 272 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 SERPINB8P50452 374 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 TESK1Q15569 626 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 C1orf185Q5T7R7 199 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 CES4AQ5XG92 561 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 NUDT13Q86X67 352 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 TAGAPQ8N103 731 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 INTS1Q8N201 2190 aaKnown RBP14.62□□□□□ -0.07
TUBB3-213ENST00000557262 LRRC25Q8N386 305 aaPredicted RBP14.62□□□□□ -0.07
TUBB3-213ENST00000557262 OR10G3Q8NGC4 313 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 TP53INP1Q96A56 240 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 SERPINI1Q99574 410 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 ZNF559Q9BR84 538 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 LRRC1Q9BTT6 524 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 VPS11Q9H270 941 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 NOL11Q9H8H0 719 aaKnown RBP14.62□□□□□ -0.07
TUBB3-213ENST00000557262 ZDHHC18Q9NUE0 388 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 Q9UFV3 132 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 KCNN3Q9UGI6 736 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 CNOT11Q9UKZ1 510 aaKnown RBP14.62□□□□□ -0.07
TUBB3-213ENST00000557262 PCDHGB3Q9Y5G1 929 aa14.62□□□□□ -0.07
TUBB3-213ENST00000557262 C2orf92A0A1B0GVN3 265 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 ANKRD33BA6NCL7 494 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 CAPN14A8MX76 684 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 FAM47E-STBD1D6RA91 191 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 PGRMC2O15173 223 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 SEMA3DO95025 777 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 AIFM1O95831 613 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 GBAP04062 536 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 CLPSP04118 112 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 RBP1P09455 135 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms