RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TIMM22Q9Y584 194 aa11.87□□□□□ -0.51
PSEN1-219ENST00000556951 KCNE2Q9Y6J6 123 aa11.87□□□□□ -0.51
PSEN1-219ENST00000556951 INTS1Q8N201 2190 aaKnown RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 NKX2-6A6NCS4 301 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 MANBAO00462 879 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 ATP5HO75947 161 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 NEURL1O76050 574 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 SEC24DO94855 1032 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 UBOX5O94941 541 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 HOXD4P09016 255 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 LINC00032P0C843 101 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 ERGP11308 486 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 ABOP16442 354 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 GNAZP19086 355 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 NCF2P19878 526 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 CASP2P42575 452 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 HNRNPH2P55795 449 aaKnown RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 IRF8Q02556 426 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 BNIP1Q12981 228 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 FASTKQ14296 549 aaKnown RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 OR1C1Q15619 314 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 HKDC1Q2TB90 917 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 PLAG1Q6DJT9 500 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 LANCL3Q6ZV70 420 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 LARP4Q71RC2 724 aaKnown RBP eCLIP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 GALNTL5Q7Z4T8 443 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 TMEM200AQ86VY9 491 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 GHDCQ8N2G8 530 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 CPSF7Q8N684 471 aaKnown RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 PPFIBP2Q8ND30 876 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 SMPDL3AQ92484 453 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 MVB12AQ96EY5 273 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 ZFYVE21Q9BQ24 234 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 HAUS8Q9BT25 410 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 YIPF2Q9BWQ6 316 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 RAB11FIP5Q9BXF6 653 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 NMUR2Q9GZQ4 415 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 TUBB1Q9H4B7 451 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 MKKSQ9NPJ1 570 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 CCDC177Q9NQR7 707 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 MRGBPQ9NV56 204 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 MKL2Q9ULH7 1088 aa11.86□□□□□ -0.51
PSEN1-219ENST00000556951 RUVBL1Q9Y265 456 aaKnown RBP11.86□□□□□ -0.51
PSEN1-219ENST00000556951 KCNE1BA0A087WTH5 132 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 OR2W5A6NFC9 320 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 E9PBE3 544 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 SLC28A1O00337 649 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 SLC22A2O15244 555 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 ULK1O75385 1050 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 KRT6AP02538 564 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 KRT6BP04259 564 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 SP1P08047 785 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 NPPBP16860 134 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 MSX1P28360 303 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 HNF4AP41235 474 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 KRT6CP48668 564 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 TBPL1P62380 186 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 AP2B1P63010 937 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 IRX1P78414 480 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-219ENST00000556951 MAT1AQ00266 395 aaKnown RBP11.85□□□□□ -0.51
PSEN1-219ENST00000556951 DMTNQ08495 405 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 CHIT1Q13231 466 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 XKR6Q5GH73 641 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 ZNF468Q5VIY5 522 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-219ENST00000556951 SLC25A25Q6KCM7 469 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 LCTLQ6UWM7 567 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 CHSY3Q70JA7 882 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 CPEB2Q7Z5Q1 589 aaKnown RBP11.85□□□□□ -0.51
PSEN1-219ENST00000556951 ZNF227Q86WZ6 799 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 WFDC11Q8NEX6 87 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 MMABQ96EY8 250 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-219ENST00000556951 C3orf30Q96M34 536 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 OR2A5Q96R48 311 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 OR4K3Q96R72 315 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 DPH7Q9BTV6 452 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 CCDC106Q9BWC9 280 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 VN1R1Q9GZP7 353 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 AKTIPQ9H8T0 292 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 TEKT2Q9UIF3 430 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 ST6GALNAC2Q9UJ37 374 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 SNX6Q9UNH7 406 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 RNF6Q9Y252 685 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 ZANQ9Y493 2812 aa11.85□□□□□ -0.51
PSEN1-219ENST00000556951 A0A0A6YYC8 382 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-219ENST00000556951 IGKV1-8A0A0C4DH67 115 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 SERTM1A2A2V5 107 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 CAPN14A8MX76 684 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 I3L1I5 382 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-219ENST00000556951 PRRG2O14669 202 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 UBDO15205 165 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 C8orf89P0DMQ9 161 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 LBPP18428 481 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 PTGER1P34995 402 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 DOC2AQ14183 400 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 BTBD16Q32M84 506 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 XKR7Q5GH72 579 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 THEMIS2Q5TEJ8 643 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 GRHL2Q6ISB3 625 aa11.84□□□□□ -0.51
PSEN1-219ENST00000556951 NXPE4Q6UWF7 544 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms